revise package structure: always predict from 1am to horizon, dataset not cut at...
[talweg.git] / pkg / R / F_Neighbors.R
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25b75559 1#' Neighbors Forecaster
3d69ff21 2#'
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3#' Predict next serie as a weighted combination of "futures of the past" days,
4#' where days in the past are chosen and weighted according to some similarity measures.
c4c329f6 5#'
102bcfda 6#' The main method is \code{predictShape()}, taking arguments data, today, memory,
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7#' predict_from, horizon respectively for the dataset (object output of
8#' \code{getData()}), the current index, the data depth (in days), the first predicted
9#' hour and the last predicted hour.
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10#' In addition, optional arguments can be passed:
11#' \itemize{
12#' \item local : TRUE (default) to constrain neighbors to be "same days within same
13#' season"
14#' \item simtype : 'endo' for a similarity based on the series only,<cr>
d2ab47a7 15#' 'exo' for a similarity based on exogenous variables only,<cr>
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16#' 'mix' for the product of 'endo' and 'exo',<cr>
17#' 'none' (default) to apply a simple average: no computed weights
18#' \item window : A window for similarities computations; override cross-validation
19#' window estimation.
20#' }
21#' The method is summarized as follows:
22#' \enumerate{
23#' \item Determine N (=20) recent days without missing values, and followed by a
24#' tomorrow also without missing values.
25#' \item Optimize the window parameters (if relevant) on the N chosen days.
26#' \item Considering the optimized window, compute the neighbors (with locality
27#' constraint or not), compute their similarities -- using a gaussian kernel if
28#' simtype != "none" -- and average accordingly the "tomorrows of neigbors" to
29#' obtain the final prediction.
30#' }
c4c329f6 31#'
4e821712 32#' @usage # NeighborsForecaster$new(pjump)
689aa1d3 33#'
102bcfda 34#' @docType class
c4c329f6 35#' @format R6 class, inherits Forecaster
3ddf1c12 36#' @aliases F_Neighbors
546b0cb6 37#'
25b75559 38NeighborsForecaster = R6::R6Class("NeighborsForecaster",
a66a84b5 39 inherit = Forecaster,
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40
41 public = list(
d2ab47a7 42 predictShape = function(data, today, memory, predict_from, horizon, ...)
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43 {
44 # (re)initialize computed parameters
a66a84b5 45 private$.params <- list("weights"=NA, "indices"=NA, "window"=NA)
3d69ff21 46
a5a3a294 47 # Do not forecast on days with NAs (TODO: softer condition...)
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48 if (any(is.na(data$getSerie(today-1)))
49 || any(is.na(data$getSerie(today)[1:(predict_from-1)])))
50 {
a5a3a294 51 return (NA)
d2ab47a7 52 }
a5a3a294 53
af3b84f4 54 # Determine indices of no-NAs days followed by no-NAs tomorrows
d2ab47a7 55 fdays = .getNoNA2(data, max(today-memory,1), today-2)
af3b84f4 56
f17665c7 57 # Get optional args
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58 local = ifelse(hasArg("local"), list(...)$local, TRUE) #same level + season?
59 simtype = ifelse(hasArg("simtype"), list(...)$simtype, "none") #or "endo", or "exo"
aa059de7 60 if (hasArg("window"))
a66a84b5 61 {
98e958ca 62 return ( private$.predictShapeAux(data,
d2ab47a7 63 fdays, today, predict_from, horizon, local, list(...)$window, simtype, TRUE) )
a66a84b5 64 }
3d69ff21 65
6774e53d 66 # Indices of similar days for cross-validation; TODO: 20 = magic number
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67 cv_days = getSimilarDaysIndices(today, data, limit=20, same_season=FALSE,
68 days_in=fdays)
5e838b3e 69
445e7bbc 70 # Optimize h : h |--> sum of prediction errors on last N "similar" days
aa059de7 71 errorOnLastNdays = function(window, simtype)
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72 {
73 error = 0
74 nb_jours = 0
5e838b3e 75 for (i in seq_along(cv_days))
3d69ff21 76 {
f17665c7 77 # mix_strategy is never used here (simtype != "mix"), therefore left blank
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78 prediction = private$.predictShapeAux(data, fdays, cv_days[i], predict_from,
79 horizon, local, window, simtype, FALSE)
f17665c7 80 if (!is.na(prediction[1]))
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81 {
82 nb_jours = nb_jours + 1
af3b84f4 83 error = error +
d2ab47a7 84 mean((data$getSerie(cv_days[i]+1)[predict_from:horizon] - prediction)^2)
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85 }
86 }
87 return (error / nb_jours)
88 }
89
445e7bbc 90 # TODO: 7 == magic number
eef54517 91 if (simtype=="endo" || simtype=="mix")
af3b84f4 92 {
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93 best_window_endo = optimize(
94 errorOnLastNdays, c(0,7), simtype="endo")$minimum
af3b84f4 95 }
eef54517 96 if (simtype=="exo" || simtype=="mix")
af3b84f4 97 {
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98 best_window_exo = optimize(
99 errorOnLastNdays, c(0,7), simtype="exo")$minimum
3d69ff21 100 }
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101
102 best_window =
103 if (simtype == "endo")
104 best_window_endo
105 else if (simtype == "exo")
106 best_window_exo
107 else if (simtype == "mix")
108 c(best_window_endo,best_window_exo)
109 else #none: value doesn't matter
110 1
111
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112 return( private$.predictShapeAux(data, fdays, today, predict_from, horizon, local,
113 best_window, simtype, TRUE) )
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114 }
115 ),
116 private = list(
3d69ff21 117 # Precondition: "today" is full (no NAs)
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118 .predictShapeAux = function(data, fdays, today, predict_from, horizon, local, window,
119 simtype, final_call)
3d69ff21 120 {
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121 fdays_cut = fdays[ fdays < today ]
122 if (length(fdays_cut) <= 1)
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123 return (NA)
124
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125 if (local)
126 {
3ddf1c12 127 # TODO: 60 == magic number
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128 fdays = getSimilarDaysIndices(today, data, limit=60, same_season=TRUE,
129 days_in=fdays_cut)
130 if (length(fdays) <= 1)
131 return (NA)
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132 # TODO: 10, 12 == magic numbers
133 fdays = .getConstrainedNeighbs(today,data,fdays,min_neighbs=10,max_neighbs=12)
134 if (length(fdays) == 1)
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135 {
136 if (final_call)
137 {
138 private$.params$weights <- 1
139 private$.params$indices <- fdays
140 private$.params$window <- 1
141 }
d2ab47a7 142 return ( data$getSerie(fdays[1]+1)[predict_from:horizon] )
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143 }
144 }
145 else
146 fdays = fdays_cut #no conditioning
147
445e7bbc 148 if (simtype == "endo" || simtype == "mix")
3d69ff21 149 {
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150 # Compute endogen similarities using given window
151 window_endo = ifelse(simtype=="mix", window[1], window)
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152
153 # Distances from last observed day to days in the past
d2ab47a7 154 lastSerie = c( data$getSerie(today-1), data$getSerie(today)[1:(predict_from-1)] )
5e838b3e 155 distances2 = sapply(fdays, function(i) {
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156 delta = lastSerie - c(data$getSerie(i),data$getSerie(i+1)[1:(predict_from-1)])
157 sqrt(mean(delta^2))
5e838b3e 158 })
3d69ff21 159
3ddf1c12 160 simils_endo <- .computeSimils(distances2, window_endo)
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161 }
162
445e7bbc 163 if (simtype == "exo" || simtype == "mix")
3d69ff21 164 {
aa059de7 165 # Compute exogen similarities using given window
445e7bbc 166 window_exo = ifelse(simtype=="mix", window[2], window)
3d69ff21 167
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168 M = matrix( ncol=1+length(fdays), nrow=1+length(data$getExo(1)) )
169 M[,1] = c( data$getLevelHat(today), as.double(data$getExoHat(today)) )
f17665c7 170 for (i in seq_along(fdays))
d2ab47a7 171 M[,i+1] = c( data$getLevel(fdays[i]), as.double(data$getExo(fdays[i])) )
3d69ff21 172
d2ab47a7 173 sigma = cov(t(M)) #NOTE: robust covariance is way too slow
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174 # TODO: 10 == magic number; more robust way == det, or always ginv()
175 sigma_inv =
176 if (length(fdays) > 10)
177 solve(sigma)
178 else
179 MASS::ginv(sigma)
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180
181 # Distances from last observed day to days in the past
5e838b3e 182 distances2 = sapply(seq_along(fdays), function(i) {
d2ab47a7 183 delta = M[,1] - M[,i+1]
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184 delta %*% sigma_inv %*% delta
185 })
3d69ff21 186
3ddf1c12 187 simils_exo <- .computeSimils(distances2, window_exo)
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188 }
189
3d69ff21 190 similarities =
f17665c7 191 if (simtype == "exo")
3d69ff21 192 simils_exo
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193 else if (simtype == "endo")
194 simils_endo
445e7bbc 195 else if (simtype == "mix")
f17665c7 196 simils_endo * simils_exo
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197 else #none
198 rep(1, length(fdays))
ea5c7e56 199 similarities = similarities / sum(similarities)
3d69ff21 200
d2ab47a7 201 prediction = rep(0, horizon-predict_from+1)
a66a84b5 202 for (i in seq_along(fdays))
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203 {
204 prediction = prediction +
205 similarities[i] * data$getSerie(fdays[i]+1)[predict_from:horizon]
206 }
99f83c9a 207
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208 if (final_call)
209 {
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210 private$.params$weights <- similarities
211 private$.params$indices <- fdays
212 private$.params$window <-
546b0cb6 213 if (simtype=="endo")
aa059de7 214 window_endo
546b0cb6 215 else if (simtype=="exo")
aa059de7 216 window_exo
eef54517 217 else if (simtype=="mix")
aa059de7 218 c(window_endo,window_exo)
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219 else #none
220 1
3d69ff21 221 }
99f83c9a 222
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223 return (prediction)
224 }
225 )
226)
3ddf1c12 227
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228# getConstrainedNeighbs
229#
230# Get indices of neighbors of similar pollution level (among same season + day type).
231#
232# @param today Index of current day
233# @param data Object of class Data
234# @param fdays Current set of "first days" (no-NA pairs)
235# @param min_neighbs Minimum number of points in a neighborhood
236# @param max_neighbs Maximum number of points in a neighborhood
237#
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238.getConstrainedNeighbs = function(today, data, fdays, min_neighbs=10, max_neighbs=12)
239{
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240 levelToday = data$getLevelHat(today)
241 levelYersteday = data$getLevel(today-1)
242 distances = sapply(fdays, function(i) {
243 sqrt((data$getLevel(i)-levelYersteday)^2 + (data$getLevel(i+1)-levelToday)^2)
244 })
245 #TODO: 1, +1, +3 : magic numbers
246 dist_thresh = 1
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247 min_neighbs = min(min_neighbs,length(fdays))
248 repeat
249 {
250 same_pollution = (distances <= dist_thresh)
251 nb_neighbs = sum(same_pollution)
252 if (nb_neighbs >= min_neighbs) #will eventually happen
253 break
d2ab47a7 254 dist_thresh = dist_thresh + ifelse(dist_thresh>1,3,1)
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255 }
256 fdays = fdays[same_pollution]
257 max_neighbs = 12
258 if (nb_neighbs > max_neighbs)
259 {
260 # Keep only max_neighbs closest neighbors
d2ab47a7 261 fdays = fdays[ order(distances[same_pollution])[1:max_neighbs] ]
3ddf1c12 262 }
c36568fa 263 fdays
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264}
265
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266# compute similarities
267#
268# Apply the gaussian kernel on computed squared distances.
269#
270# @param distances2 Squared distances
271# @param window Window parameter for the kernel
272#
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273.computeSimils <- function(distances2, window)
274{
275 sd_dist = sd(distances2)
276 if (sd_dist < .25 * sqrt(.Machine$double.eps))
277 {
278# warning("All computed distances are very close: stdev too small")
279 sd_dist = 1 #mostly for tests... FIXME:
280 }
281 exp(-distances2/(sd_dist*window^2))
282}