Forgot to add weights as a field in Optimparams class

[morpheus.git] / reports / run_accu_cl.sh

diff --git a/reports/run_accu_cl.sh b/reports/run_accu_cl.sh
index 6d6ac21..0cd877b 100644 (file)
--- a/reports/run_accu_cl.sh
+++ b/reports/run_accu_cl.sh
@@ -3,7 +3,7 @@
 #$ -N morpheus
 #$ -m abes
 #$ -M benjamin@auder.net
-#$ -pe make 5
+#$ -pe make 50
 #$ -l h_vmem=1G
 #$ -j y
 #$ -o .output
@@ -12,20 +12,18 @@ rm -f .output
 WORKDIR=/workdir2/auder/morpheus/reports
 cd $WORKDIR
 
-module load R/3.6.0
+module load R/3.6.1
 
-N=1000
+N=10
 n=1e5
 nc=50
 
-link=logit
-# and disable d=20 to run faster
-
-# arg --vanilla maybe possible on cluster
-for d in 2 5 10; do
-       #for link in "logit" "probit"; do
-               R --slave --args N=$N n=$n nc=$nc d=$d link=$link <accuracy.R >out_$n$link$d 2>&1
-       #done
+for d in 2 5 10 20; do
+       for link in "logit" "probit"; do
+               for weights in "1,1,1" "6,3,1"; do
+                       R --slave --args N=$N n=$n nc=$nc d=$d link=$link weights=$weights <accuracy.R >out_${n}_${link}_${d}_${weights} 2>&1
+               done
+       done
 done
 
 #for d in 2 5; do