Easier testing pocedure

[valse.git] / test / run.sh

diff --git a/test/run.sh b/test/run.sh
new file mode 100755 (executable)
index 0000000..32cd0a9
--- /dev/null
+++ b/test/run.sh
@@ -0,0 +1,39 @@
+#!/bin/sh
+set -e
+
+#Testing procedure for EMGLLF (inside this folder):
+
+algo=$1 #EMGLLF or EMGrank,
+        #second arg indicate if rebuild or rebuild+clean requested
+
+if [ "$2" == 'c' ]; then
+       #0.1) Clean package + C testing code
+       find ../pkg/man/ -type f ! -name 'valse-package.Rd' -delete
+       rm -f ../pkg/NAMESPACE
+       # Erase object and library files
+       rm -f ../pkg/src/*.so
+       rm -f ../pkg/src/adapters/*.o
+       make cclean
+fi
+
+if [ "$2" == 'r' ] || [ "$2" == 'c' ]; then
+       #0.2) Install current version of the package (WARNING: roxygen 2 v5.0.1)
+       #   --> devtools::install_github('klutometis/roxygen@v5.0.1')
+       echo "setwd('../pkg');library(roxygen2);roxygenize('.')" | R --slave
+       R CMD INSTALL ../pkg
+fi
+
+#1) Generate data using R versions of EMGLLF/EMGrank (slow, but trusted)
+cd generate_test_data/
+echo -e "source('generateRunSaveTest_$algo.R');\n \
+               # I'm happy with default values - feel free to give args\n \
+               generateRunSaveTest_$algo() " \
+       | R --slave
+cd ..
+
+#2) Compile test C code into an executable named "test.$algo"
+make test.$algo
+
+#3) Run it with valgrind!
+#valgrind 
+./test.$algo