fix generateRunTest for constructionModelesEMGrank; remove man pages (will be roxygen...

[valse.git] / src / test / generate_test_data / generateRunSaveTest_constructionModelesLassoRank.m

diff --git a/src/test/generate_test_data/generateRunSaveTest_constructionModelesLassoRank.m b/src/test/generate_test_data/generateRunSaveTest_constructionModelesLassoRank.m
deleted file mode 100644 (file)
index a599f19..0000000
--- a/src/test/generate_test_data/generateRunSaveTest_constructionModelesLassoRank.m
+++ /dev/null
@@ -1,59 +0,0 @@
-function[] = generateRunSaveTest_constructionModelesLassoRank(n, p, m, k, L, mini, maxi, gamma, rangmin, rangmax, varargin)
-
-       %set defaults for optional inputs
-       optargs = {200 15 10 3 12 5 10 1.0 3 6};
-       %replace defaults by user parameters
-       optargs(1:length(varargin)) = varargin;
-       [n, p, m, k, L, mini, maxi, gamma, rangmin, rangmax] = optargs{:};
-       mini = int64(mini);
-       maxi = int64(maxi);
-       rangmin = int64(rangmin);
-       rangmax = int64(rangmax);
-       tau = 1e-6;
-
-       Pi = zeros(k,L);
-       for l=1:L
-               Pi(:,l) = (1.0/k)*ones(1,k);
-       end
-       Rho = zeros(m,m,k,L);
-       for l=1:L
-               for r=1:k
-                       Rho(:,:,r,l) = eye(m);
-               end
-       end
-
-       %Generate X and Y
-       [X, Y, ~] = generateIOdefault(n, p, m, k);
-
-       A1 = zeros(p,L,'int64');
-    for i=1:L
-        A1(:,i) = 1:p;
-    end
-
-       %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
-
-       testFolder = 'data/';
-       mkdir(testFolder);
-       delimiter = ' ';
-
-       %save inputs
-       dlmwrite(strcat(testFolder,'Rho'), reshape(Rho,1,[]), delimiter);
-       dlmwrite(strcat(testFolder,'Pi'), reshape(Pi,1,[]), delimiter);
-       dlmwrite(strcat(testFolder,'mini'), mini, delimiter);
-       dlmwrite(strcat(testFolder,'maxi'), maxi, delimiter);
-       dlmwrite(strcat(testFolder,'X'), reshape(X,1,[]), delimiter);
-       dlmwrite(strcat(testFolder,'Y'), reshape(Y,1,[]), delimiter);
-       dlmwrite(strcat(testFolder,'tau'), tau, delimiter);
-       dlmwrite(strcat(testFolder,'A1'), reshape(A1,1,[]), delimiter);
-       dlmwrite(strcat(testFolder,'rangmin'), rangmin, delimiter);
-       dlmwrite(strcat(testFolder,'rangmax'), rangmax, delimiter);
-       dlmwrite(strcat(testFolder,'dimensions'), [n,p,m,k,L], delimiter);
-
-       [phi,llh] = constructionModelesLassoRank(Pi,Rho,mini,maxi,X,Y,tau,A1,rangmin,rangmax);
-
-       %save output
-       Size = (rangmax-rangmin+1)^k;
-       dlmwrite(strcat(testFolder,'phi'), reshape(phi,1,[]), delimiter);
-       dlmwrite(strcat(testFolder,'llh'), reshape(llh,1,[]), delimiter);
-
-end