fix generateRunTest for constructionModelesEMGrank; remove man pages (will be roxygen...

[valse.git] / src / test / generate_test_data / generateRunSaveTest_EMGrank.m

diff --git a/src/test/generate_test_data/generateRunSaveTest_EMGrank.m b/src/test/generate_test_data/generateRunSaveTest_EMGrank.m
deleted file mode 100644 (file)
index 2301aa5..0000000
--- a/src/test/generate_test_data/generateRunSaveTest_EMGrank.m
+++ /dev/null
@@ -1,45 +0,0 @@
-function[] = generateRunSaveTest_EMGrank(n, p, m, k, mini, maxi, gamma, rank, varargin)
-
-       %set defaults for optional inputs
-       optargs = {200 15 10 3 5 10 1.0 1:3};
-       %replace defaults by user parameters
-       optargs(1:length(varargin)) = varargin;
-       [n, p, m, k, mini, maxi, gamma, rank] = optargs{:};
-       mini = int64(mini);
-       maxi = int64(maxi);
-       rank = int64(rank);
-       tau = 1e-6;
-
-       Pi = (1.0/k)*ones(1,k);
-       Rho = zeros(m,m,k);
-       for r=1:k
-               Rho(:,:,r) = eye(m);
-       end
-
-       %Generate X and Y
-       [X, Y, ~] = generateIOdefault(n, p, m, k);
-
-       %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
-
-       testFolder = 'data/';
-       mkdir(testFolder);
-       delimiter = ' ';
-
-       %save inputs
-       dlmwrite(strcat(testFolder,'Rho'), reshape(Rho,1,[]), delimiter);
-       dlmwrite(strcat(testFolder,'Pi'), Pi, delimiter);
-       dlmwrite(strcat(testFolder,'mini'), mini, delimiter);
-       dlmwrite(strcat(testFolder,'maxi'), maxi, delimiter);
-       dlmwrite(strcat(testFolder,'X'), reshape(X,1,[]), delimiter);
-       dlmwrite(strcat(testFolder,'Y'), reshape(Y,1,[]), delimiter);
-       dlmwrite(strcat(testFolder,'tau'), tau, delimiter);
-       dlmwrite(strcat(testFolder,'rank'), rank, delimiter);
-       dlmwrite(strcat(testFolder,'dimensions'), [n,p,m,k], delimiter);;
-
-       [phi,LLF] = EMGrank(Pi,Rho,mini,maxi,X,Y,tau,rank);
-
-       %save output
-       dlmwrite(strcat(testFolder,'phi'), reshape(phi,1,[]), delimiter);
-       dlmwrite(strcat(testFolder,'LLF'), LLF, delimiter);
-
-end