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prepare EMGLLF / EMGrank wrappers, simplify folder generateTestData
[valse.git]
/
src
/
test
/
generate_test_data
/
generateRunSaveTest_EMGLLF.R
diff --git
a/src/test/generate_test_data/generateRunSaveTest_EMGLLF.R
b/src/test/generate_test_data/generateRunSaveTest_EMGLLF.R
index
49e2258
..
fe8f847
100644
(file)
--- a/
src/test/generate_test_data/generateRunSaveTest_EMGLLF.R
+++ b/
src/test/generate_test_data/generateRunSaveTest_EMGLLF.R
@@
-1,7
+1,9
@@
+source("EMGLLF.R")
+
generateRunSaveTest_EMGLLF = function(n=200, p=15, m=10, k=3, mini=5, maxi=10,
gamma=1., lambda=0.5, tau=1e-6)
{
generateRunSaveTest_EMGLLF = function(n=200, p=15, m=10, k=3, mini=5, maxi=10,
gamma=1., lambda=0.5, tau=1e-6)
{
- testFolder = "data/"
+ testFolder = "
../
data/"
dir.create(testFolder, showWarnings=FALSE, mode="0755")
require(valse)
dir.create(testFolder, showWarnings=FALSE, mode="0755")
require(valse)
@@
-31,7
+33,7
@@
generateRunSaveTest_EMGLLF = function(n=200, p=15, m=10, k=3, mini=5, maxi=10,
row.names=F, col.names=F)
write.table(as.double(tau), paste(testFolder,"tau",sep=""),
row.names=F, col.names=F)
row.names=F, col.names=F)
write.table(as.double(tau), paste(testFolder,"tau",sep=""),
row.names=F, col.names=F)
- write.table(as.integer(c(n,p,m,k)), paste(testFolder,"dimens
xy
ns",sep=""),
+ write.table(as.integer(c(n,p,m,k)), paste(testFolder,"dimens
io
ns",sep=""),
row.names=F, col.names=F)
res = EMGLLF(params$phiInit,params$rhoInit,params$piInit,params$gamInit,mini,maxi,
row.names=F, col.names=F)
res = EMGLLF(params$phiInit,params$rhoInit,params$piInit,params$gamInit,mini,maxi,