prepare structure for R package
[valse.git] / src / adapters / EMGrank_interface.c
CommitLineData
1d3c1faa
BA
1#include "ioutils.h"
2#include "EMGrank.h"
3#include <mex.h>
4
5// nlhs, nrhs: resp. numbers of out and in parameters.
6// plhs: array of out parameters, each being a mxArray
7// plhs: array of in parameters (immutable), each being a mxArray
8//
9// MATLAB translates a call [A,B] = fun(C,D) into mexFunction(2,{A,B},2,{C,D}).
10// Then mxArrayS are adapted to be passed to a regular C function,
11// and the results are translated back to mxArrayS into plhs.
12void mexFunction(
13 int nlhs,
14 mxArray* plhs[],
15 int nrhs,
16 const mxArray* prhs[])
17{
18 // Basic sanity checks
19 if (nrhs!=8)
20 mexErrMsgIdAndTxt("select:EMGrank:nrhs","8 inputs required.");
21 if (nlhs!=2)
22 mexErrMsgIdAndTxt("select:EMGrank:nlhs","3 outputs required.");
23
24 // Get matrices dimensions
25 const mwSize n = mxGetDimensions(prhs[4])[0];
26 const mwSize p = mxGetDimensions(prhs[4])[1];
27 const mwSize m = mxGetDimensions(prhs[1])[0];
28 const mwSize k = mxGetDimensions(prhs[1])[2];
29
30 ////////////
31 // INPUTS //
32 ////////////
33
34 // Pi
35 Real* Pi = mxGetPr(prhs[0]);
36
37 // Rho
38 const mwSize* dimRho = mxGetDimensions(prhs[1]);
39 Real* brRho = matlabToBrArray_real(mxGetPr(prhs[1]), dimRho, 3);
40
41 // min number of iterations
42 Int mini = ((Int*)mxGetData(prhs[2]))[0];
43
44 // max number of iterations
45 Int maxi = ((Int*)mxGetData(prhs[3]))[0];
46
47 // X
48 const mwSize* dimX = mxGetDimensions(prhs[4]);
49 Real* brX = matlabToBrArray_real(mxGetPr(prhs[4]), dimX, 2);
50
51 // Y
52 const mwSize* dimY = mxGetDimensions(prhs[5]);
53 Real* brY = matlabToBrArray_real(mxGetPr(prhs[5]), dimY, 2);
54
55 // tau
56 Real tau = mxGetScalar(prhs[6]);
57
58 // rank
59 Int* rank = (Int*)mxGetData(prhs[7]);
60
61 /////////////
62 // OUTPUTS //
63 /////////////
64
65 // phi
66 const mwSize dimPhi[] = {p, m, k};
67 plhs[0] = mxCreateNumericArray(3,dimPhi,mxDOUBLE_CLASS,mxREAL);
68 Real* phi = mxGetPr(plhs[0]);
69
70 // LLF
71 plhs[1] = mxCreateNumericMatrix(1,1,mxDOUBLE_CLASS,mxREAL);
72 Real* LLF = mxGetPr(plhs[1]);
73
74 /////////////////////
75 // Call to EMGrank //
76 /////////////////////
77
78 EMGrank(Pi,brRho,mini,maxi,brX,brY,tau,rank,
79 phi,LLF,
80 n,p,m,k);
81
82 free(brRho);
83 free(brX);
84 free(brY);
85
86 //post-processing: convert by-rows outputs to MATLAB matrices
87 Real* mlPhi = brToMatlabArray_real(phi, dimPhi, 3);
88 copyArray(mlPhi, phi, dimPhi[0]*dimPhi[1]*dimPhi[2]);
89 free(mlPhi);
90}