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[talweg.git] / pkg / R / plot.R

diff --git a/pkg/R/plot.R b/pkg/R/plot.R
index 5ea4843..48b456c 100644 (file)
--- a/pkg/R/plot.R
+++ b/pkg/R/plot.R
@@ -1,8 +1,8 @@
 #' Plot curves
 #'
-#' Plot a range of curves in data
+#' Plot a range of curves in data.
 #'
-#' @param data Object of class Data
+#' @inheritParams computeError
 #' @param indices Range of indices (integers or dates)
 #'
 #' @export
@@ -22,9 +22,9 @@ plotCurves <- function(data, indices=seq_len(data$getSize()))
 
 #' Plot error
 #'
-#' Draw error graphs, potentially from several runs of \code{computeForecast}
+#' Draw error graphs, potentially from several runs of \code{computeForecast()}.
 #'
-#' @param err Error as returned by \code{computeError}
+#' @param err Error as returned by \code{computeError()}
 #' @param cols Colors for each error (default: 1,2,3,...)
 #'
 #' @seealso \code{\link{plotCurves}}, \code{\link{plotPredReal}},
@@ -74,10 +74,9 @@ plotError <- function(err, cols=seq_along(err))
 
 #' Plot measured / predicted
 #'
-#' Plot measured curve (in black) and predicted curve (in blue)
+#' Plot measured curve (in black) and predicted curve (in blue).
 #'
-#' @param data Object return by \code{getData}
-#' @param pred Object as returned by \code{computeForecast}
+#' @inheritParams computeError
 #' @param index Index in forecasts (integer or date)
 #'
 #' @export
@@ -95,9 +94,9 @@ plotPredReal <- function(data, pred, index)
 
 #' Plot similarities
 #'
-#' Plot histogram of similarities (weights)
+#' Plot histogram of similarities (weights), for 'Neighbors' method.
 #'
-#' @param pred Object as returned by \code{computeForecast}
+#' @inheritParams computeError
 #' @param index Index in forecasts (integer or date)
 #'
 #' @export
@@ -112,10 +111,10 @@ plotSimils <- function(pred, index)
 
 #' Functional boxplot
 #'
-#' Draw the functional boxplot on the left, and bivariate plot on the right
+#' Draw the functional boxplot on the left, and bivariate plot on the right.
 #'
-#' @param data Object return by \code{getData}
-#' @param indices integer or date indices to process
+#' @inheritParams computeError
+#' @inheritParams plotCurves
 #'
 #' @export
 plotFbox <- function(data, indices=seq_len(data$getSize()))
@@ -138,10 +137,10 @@ plotFbox <- function(data, indices=seq_len(data$getSize()))
 
 #' Compute filaments
 #'
-#' Get similar days in the past, as black as distances are small
+#' Obtain similar days in the past, and (optionally) plot them -- as black as distances
+#' are small.
 #'
-#' @param data Object as returned by \code{getData}
-#' @param pred Object of class Forecast
+#' @inheritParams computeError
 #' @param index Index in forecast (integer or date)
 #' @param limit Number of neighbors to consider
 #' @param plot Should the result be plotted?
@@ -197,9 +196,9 @@ computeFilaments <- function(data, pred, index, limit=60, plot=TRUE)
 
 #' Functional boxplot on filaments
 #'
-#' Draw the functional boxplot on filaments obtained by \code{computeFilaments}
+#' Draw the functional boxplot on filaments obtained by \code{computeFilaments()}.
 #'
-#' @param data Object return by \code{getData}
+#' @inheritParams computeError
 #' @param fil Output of \code{computeFilaments}
 #'
 #' @export
@@ -227,10 +226,10 @@ plotFilamentsBox = function(data, fil)
 #' Plot relative conditional variability / absolute variability
 #'
 #' Draw the relative conditional variability / absolute variability based on filaments
-#' obtained by \code{computeFilaments}
+#' obtained by \code{computeFilaments()}.
 #'
-#' @param data Object return by \code{getData}
-#' @param fil Output of \code{computeFilaments}
+#' @inheritParams computeError
+#' @inheritParams plotFilamentsBox
 #'
 #' @export
 plotRelVar = function(data, fil)