TODO: unit tests for simil days
[talweg.git] / pkg / R / F_Neighbors.R
index c55291a..ffb068f 100644 (file)
@@ -1,9 +1,36 @@
-#' @include Forecaster.R
-#'
 #' Neighbors Forecaster
 #'
-#' Predict tomorrow as a weighted combination of "futures of the past" days.
-#' Inherits \code{\link{Forecaster}}
+#' Predict next serie as a weighted combination of "futures of the past" days,
+#' where days in the past are chosen and weighted according to some similarity measures.
+#'
+#' The main method is \code{predictShape()}, taking arguments data, today, memory,
+#' horizon respectively for the dataset (object output of \code{getData()}), the current
+#' index, the data depth (in days) and the number of time steps to forecast.
+#' In addition, optional arguments can be passed:
+#' \itemize{
+#'   \item local : TRUE (default) to constrain neighbors to be "same days within same
+#'     season"
+#'   \item simtype : 'endo' for a similarity based on the series only,<cr>
+#'             'exo' for a similaruty based on exogenous variables only,<cr>
+#'             'mix' for the product of 'endo' and 'exo',<cr>
+#'             'none' (default) to apply a simple average: no computed weights
+#'   \item window : A window for similarities computations; override cross-validation
+#'     window estimation.
+#' }
+#' The method is summarized as follows:
+#' \enumerate{
+#'   \item Determine N (=20) recent days without missing values, and followed by a
+#'     tomorrow also without missing values.
+#'   \item Optimize the window parameters (if relevant) on the N chosen days.
+#'   \item Considering the optimized window, compute the neighbors (with locality
+#'     constraint or not), compute their similarities -- using a gaussian kernel if
+#'     simtype != "none" -- and average accordingly the "tomorrows of neigbors" to
+#'     obtain the final prediction.
+#' }
+#'
+#' @docType class
+#' @format R6 class, inherits Forecaster
+#' @aliases F_Neighbors
 #'
 NeighborsForecaster = R6::R6Class("NeighborsForecaster",
        inherit = Forecaster,
@@ -19,11 +46,11 @@ NeighborsForecaster = R6::R6Class("NeighborsForecaster",
                                return (NA)
 
                        # Determine indices of no-NAs days followed by no-NAs tomorrows
-                       fdays = getNoNA2(data, max(today-memory,1), today-1)
+                       fdays = .getNoNA2(data, max(today-memory,1), today-1)
 
                        # Get optional args
-                       local = ifelse(hasArg("local"), list(...)$local, FALSE) #same level + season?
-                       simtype = ifelse(hasArg("simtype"), list(...)$simtype, "mix") #or "endo", or "exo"
+                       local = ifelse(hasArg("local"), list(...)$local, TRUE) #same level + season?
+                       simtype = ifelse(hasArg("simtype"), list(...)$simtype, "none") #or "endo", or "exo"
                        if (hasArg("window"))
                        {
                                return ( private$.predictShapeAux(data,
@@ -34,7 +61,7 @@ NeighborsForecaster = R6::R6Class("NeighborsForecaster",
                        cv_days = getSimilarDaysIndices(today, data, limit=20, same_season=FALSE,
                                days_in=fdays)
 
-                       # Optimize h : h |--> sum of prediction errors on last 45 "similar" days
+                       # Optimize h : h |--> sum of prediction errors on last N "similar" days
                        errorOnLastNdays = function(window, simtype)
                        {
                                error = 0
@@ -54,32 +81,30 @@ NeighborsForecaster = R6::R6Class("NeighborsForecaster",
                                return (error / nb_jours)
                        }
 
-                       if (simtype != "endo")
-                       {
-                               best_window_exo = optimize(
-                                       errorOnLastNdays, c(0,7), simtype="exo")$minimum
-                       }
-                       if (simtype != "exo")
+                       # TODO: 7 == magic number
+                       if (simtype=="endo" || simtype=="mix")
                        {
                                best_window_endo = optimize(
                                        errorOnLastNdays, c(0,7), simtype="endo")$minimum
                        }
-
-                       if (simtype == "endo")
-                       {
-                               return (private$.predictShapeAux(data, fdays, today, horizon, local,
-                                       best_window_endo, "endo", TRUE))
-                       }
-                       if (simtype == "exo")
-                       {
-                               return (private$.predictShapeAux(data, fdays, today, horizon, local,
-                                       best_window_exo, "exo", TRUE))
-                       }
-                       if (simtype == "mix")
+                       if (simtype=="exo" || simtype=="mix")
                        {
-                               return(private$.predictShapeAux(data, fdays, today, horizon, local,
-                                       c(best_window_endo,best_window_exo), "mix", TRUE))
+                               best_window_exo = optimize(
+                                       errorOnLastNdays, c(0,7), simtype="exo")$minimum
                        }
+
+                       best_window =
+                               if (simtype == "endo")
+                                       best_window_endo
+                               else if (simtype == "exo")
+                                       best_window_exo
+                               else if (simtype == "mix")
+                                       c(best_window_endo,best_window_exo)
+                               else #none: value doesn't matter
+                                       1
+
+                       return(private$.predictShapeAux(data, fdays, today, horizon, local,
+                               best_window, simtype, TRUE))
                }
        ),
        private = list(
@@ -93,33 +118,14 @@ NeighborsForecaster = R6::R6Class("NeighborsForecaster",
 
                        if (local)
                        {
-                               # Neighbors: days in "same season"; TODO: 60 == magic number...
+                               # TODO: 60 == magic number
                                fdays = getSimilarDaysIndices(today, data, limit=60, same_season=TRUE,
                                        days_in=fdays_cut)
                                if (length(fdays) <= 1)
                                        return (NA)
-                               levelToday = data$getLevel(today)
-                               distances = sapply(fdays, function(i) abs(data$getLevel(i)-levelToday))
-                               #TODO: 2, 3, 5, 10 magic numbers here...
-                               dist_thresh = 2
-                               min_neighbs = min(3,length(fdays))
-                               repeat
-                               {
-                                       same_pollution = (distances <= dist_thresh)
-                                       nb_neighbs = sum(same_pollution)
-                                       if (nb_neighbs >= min_neighbs) #will eventually happen
-                                               break
-                                       dist_thresh = dist_thresh + 3
-                               }
-                               fdays = fdays[same_pollution]
-                               max_neighbs = 10
-                               if (nb_neighbs > max_neighbs)
-                               {
-                                       # Keep only max_neighbs closest neighbors
-                                       fdays = fdays[
-                                               sort(distances[same_pollution],index.return=TRUE)$ix[1:max_neighbs] ]
-                               }
-                               if (length(fdays) == 1) #the other extreme...
+                               # TODO: 10, 12 == magic numbers
+                               fdays = .getConstrainedNeighbs(today,data,fdays,min_neighbs=10,max_neighbs=12)
+                               if (length(fdays) == 1)
                                {
                                        if (final_call)
                                        {
@@ -127,13 +133,13 @@ NeighborsForecaster = R6::R6Class("NeighborsForecaster",
                                                private$.params$indices <- fdays
                                                private$.params$window <- 1
                                        }
-                                       return ( data$getSerie(fdays[1])[1:horizon] ) #what else?!
+                                       return ( data$getSerie(fdays[1])[1:horizon] )
                                }
                        }
                        else
                                fdays = fdays_cut #no conditioning
 
-                       if (simtype != "exo")
+                       if (simtype == "endo" || simtype == "mix")
                        {
                                # Compute endogen similarities using given window
                                window_endo = ifelse(simtype=="mix", window[1], window)
@@ -145,19 +151,13 @@ NeighborsForecaster = R6::R6Class("NeighborsForecaster",
                                        mean(delta^2)
                                })
 
-                               sd_dist = sd(distances2)
-                               if (sd_dist < .25 * sqrt(.Machine$double.eps))
-                               {
-#                                      warning("All computed distances are very close: stdev too small")
-                                       sd_dist = 1 #mostly for tests... FIXME:
-                               }
-                               simils_endo = exp(-distances2/(sd_dist*window_endo^2))
+                               simils_endo <- .computeSimils(distances2, window_endo)
                        }
 
-                       if (simtype != "endo")
+                       if (simtype == "exo" || simtype == "mix")
                        {
                                # Compute exogen similarities using given window
-                               h_exo = ifelse(simtype=="mix", window[2], window)
+                               window_exo = ifelse(simtype=="mix", window[2], window)
 
                                M = matrix( nrow=1+length(fdays), ncol=1+length(data$getExo(today)) )
                                M[1,] = c( data$getLevel(today), as.double(data$getExo(today)) )
@@ -178,13 +178,7 @@ NeighborsForecaster = R6::R6Class("NeighborsForecaster",
                                        delta %*% sigma_inv %*% delta
                                })
 
-                               sd_dist = sd(distances2)
-                               if (sd_dist < .25 * sqrt(.Machine$double.eps))
-                               {
-#                                      warning("All computed distances are very close: stdev too small")
-                                       sd_dist = 1 #mostly for tests... FIXME:
-                               }
-                               simils_exo = exp(-distances2/(sd_dist*window_exo^2))
+                               simils_exo <- .computeSimils(distances2, window_exo)
                        }
 
                        similarities =
@@ -192,8 +186,10 @@ NeighborsForecaster = R6::R6Class("NeighborsForecaster",
                                        simils_exo
                                else if (simtype == "endo")
                                        simils_endo
-                               else #mix
+                               else if (simtype == "mix")
                                        simils_endo * simils_exo
+                               else #none
+                                       rep(1, length(fdays))
                        similarities = similarities / sum(similarities)
 
                        prediction = rep(0, horizon)
@@ -209,11 +205,82 @@ NeighborsForecaster = R6::R6Class("NeighborsForecaster",
                                                window_endo
                                        else if (simtype=="exo")
                                                window_exo
-                                       else #mix
+                                       else if (simtype=="mix")
                                                c(window_endo,window_exo)
+                                       else #none
+                                               1
                        }
 
                        return (prediction)
                }
        )
 )
+
+#' getNoNA2
+#'
+#' Get indices in data of no-NA series followed by no-NA, within [first,last] range.
+#'
+#' @inheritParams dateIndexToInteger
+#' @param first First index (included)
+#' @param last Last index (included)
+#'
+.getNoNA2 = function(data, first, last)
+{
+       (first:last)[ sapply(first:last, function(i)
+               !any( is.na(data$getCenteredSerie(i)) | is.na(data$getCenteredSerie(i+1)) )
+       ) ]
+}
+
+#' getConstrainedNeighbs
+#'
+#' Get indices of neighbors of similar pollution level (among same season + day type).
+#'
+#' @param today Index of current day
+#' @param data Object of class Data
+#' @param fdays Current set of "first days" (no-NA pairs)
+#' @param min_neighbs Minimum number of points in a neighborhood
+#' @param max_neighbs Maximum number of points in a neighborhood
+#'
+.getConstrainedNeighbs = function(today, data, fdays, min_neighbs=10, max_neighbs=12)
+{
+       levelToday = data$getLevel(today)
+       distances = sapply(fdays, function(i) abs(data$getLevel(i)-levelToday))
+       #TODO: 2, +3 : magic numbers
+       dist_thresh = 2
+       min_neighbs = min(min_neighbs,length(fdays))
+       repeat
+       {
+               same_pollution = (distances <= dist_thresh)
+               nb_neighbs = sum(same_pollution)
+               if (nb_neighbs >= min_neighbs) #will eventually happen
+                       break
+               dist_thresh = dist_thresh + 3
+       }
+       fdays = fdays[same_pollution]
+       max_neighbs = 12
+       if (nb_neighbs > max_neighbs)
+       {
+               # Keep only max_neighbs closest neighbors
+               fdays = fdays[
+                       sort(distances[same_pollution],index.return=TRUE)$ix[1:max_neighbs] ]
+       }
+       fdsays
+}
+
+#' compute similarities
+#'
+#' Apply the gaussian kernel on computed squared distances.
+#'
+#' @param distances2 Squared distances
+#' @param window Window parameter for the kernel
+#'
+.computeSimils <- function(distances2, window)
+{
+       sd_dist = sd(distances2)
+       if (sd_dist < .25 * sqrt(.Machine$double.eps))
+       {
+#              warning("All computed distances are very close: stdev too small")
+               sd_dist = 1 #mostly for tests... FIXME:
+       }
+       exp(-distances2/(sd_dist*window^2))
+}