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some few things
[valse.git]
/
src
/
test
/
generate_test_data
/
generateRunSaveTest_EMGrank.R
diff --git
a/src/test/generate_test_data/generateRunSaveTest_EMGrank.R
b/src/test/generate_test_data/generateRunSaveTest_EMGrank.R
index
a690cf5
..
99da9bc
100644
(file)
--- a/
src/test/generate_test_data/generateRunSaveTest_EMGrank.R
+++ b/
src/test/generate_test_data/generateRunSaveTest_EMGrank.R
@@
-1,3
+1,5
@@
+source("EMGrank.R")
+
generateRunSaveTest_EMGrank = function(n=200, p=15, m=10, k=3, mini=5, maxi=10, gamma=1.0,
rank = c(1,2,4))
{
generateRunSaveTest_EMGrank = function(n=200, p=15, m=10, k=3, mini=5, maxi=10, gamma=1.0,
rank = c(1,2,4))
{
@@
-9,7
+11,7
@@
generateRunSaveTest_EMGrank = function(n=200, p=15, m=10, k=3, mini=5, maxi=10,
require(valse)
xy = valse:::generateXYdefault(n, p, m, k)
require(valse)
xy = valse:::generateXYdefault(n, p, m, k)
- testFolder = "data/"
+ testFolder = "
../
data/"
dir.create(testFolder, showWarnings=FALSE, mode="0755")
#save inputs
write.table(as.double(rho), paste(testFolder,"rho",sep=""),
dir.create(testFolder, showWarnings=FALSE, mode="0755")
#save inputs
write.table(as.double(rho), paste(testFolder,"rho",sep=""),
@@
-28,7
+30,7
@@
generateRunSaveTest_EMGrank = function(n=200, p=15, m=10, k=3, mini=5, maxi=10,
row.names=F, col.names=F)
write.table(as.integer(rank), paste(testFolder,"rank",sep=""),
row.names=F, col.names=F)
row.names=F, col.names=F)
write.table(as.integer(rank), paste(testFolder,"rank",sep=""),
row.names=F, col.names=F)
- write.table(as.integer(c(n,p,m,k)), paste(testFolder,"dimens
xy
ns",sep=""),
+ write.table(as.integer(c(n,p,m,k)), paste(testFolder,"dimens
io
ns",sep=""),
row.names=F, col.names=F)
res = EMGrank(pi,rho,mini,maxi,xy$X,xy$Y,tau,rank)
row.names=F, col.names=F)
res = EMGrank(pi,rho,mini,maxi,xy$X,xy$Y,tau,rank)