projects / valse.git / blame
| Commit | Line | Data |
|---|---|---|
| c3bc4705 BA |
1 | generateRunSaveTest_selectiontotale= function(n=200, p=15, m=10, k=3, mini=5, maxi=10, gamma=1.0, |
| 2 | glambda=list(0.0,0.01,0.02,0.03,0.05,0.1,0.2,0.3,0.5,0.7,0.85,0.99)) | |
| 3 | { | |
| ef67d338 BA |
4 | tau = 1e-6; |
| 5 | seuil = 1e-15; | |
| c3bc4705 | 6 | require(valse) |
| ef67d338 BA |
7 | params = valse:::basicInitParameters(n, p, m, k) |
| 8 | xy = valse:::generateXYdefault(n, p, m, k) | |
| 9 | L = length(glambda) | |
| c3bc4705 | 10 | |
| ef67d338 BA |
11 | testFolder = "data/" |
| 12 | dir.create(testFolder, showWarnings=FALSE, mode="0755") | |
| f1b906da | 13 | #save inputs |
| c3bc4705 BA |
14 | write.table(as.double(params$phiInit), paste(testFolder,"phiInit",sep=""), |
| 15 | row.names=F, col.names=F) | |
| 16 | write.table(as.double(params$rhoInit), paste(testFolder,"rhoInit",sep=""), | |
| 17 | row.names=F, col.names=F) | |
| 18 | write.table(as.double(params$piInit), paste(testFolder,"piInit",sep=""), | |
| 19 | row.names=F, col.names=F) | |
| 20 | write.table(as.double(params$gamInit), paste(testFolder,"gamInit",sep=""), | |
| 21 | row.names=F, col.names=F) | |
| 22 | write.table(as.integer(mini), paste(testFolder,"mini",sep=""), | |
| 23 | row.names=F, col.names=F) | |
| 24 | write.table(as.integer(maxi), paste(testFolder,"maxi",sep=""), | |
| 25 | row.names=F, col.names=F) | |
| 26 | write.table(as.double(gamma), paste(testFolder,"gamma",sep=""), | |
| 27 | row.names=F, col.names=F) | |
| 28 | write.table(as.double(glambda), paste(testFolder,"lambda",sep=""), | |
| 29 | row.names=F, col.names=F) | |
| ef67d338 BA |
30 | write.table(as.double(xy$X), paste(testFolder,"X",sep=""), |
| 31 | row.names=F, col.names=F) | |
| 32 | write.table(as.double(xy$Y), paste(testFolder,"Y",sep=""), | |
| c3bc4705 | 33 | row.names=F, col.names=F) |
| ef67d338 | 34 | write.table(as.double(seuil), paste(testFolder,"seuil",sep=""), |
| c3bc4705 BA |
35 | row.names=F, col.names=F) |
| 36 | write.table(as.double(tau), paste(testFolder,"tau",sep=""), | |
| 37 | row.names=F, col.names=F) | |
| ef67d338 | 38 | write.table(as.integer(c(n,p,m,k,L)), paste(testFolder,"dimensions",sep=""), |
| c3bc4705 BA |
39 | row.names=F, col.names=F) |
| 40 | ||
| 41 | res = selectiontotale(params$phiInit,params$rhoInit,params$piInit,params$gamInit, | |
| ef67d338 | 42 | mini,maxi,gamma,glambda,xy$X,xy$Y,seuil, tau) |
| c3bc4705 | 43 | |
| f1b906da | 44 | #save output |
| c3bc4705 BA |
45 | write.table(as.double(res$A1), paste(testFolder,"A1",sep=""), row.names=F, col.names=F) |
| 46 | write.table(as.double(res$A2), paste(testFolder,"A2",sep=""), row.names=F, col.names=F) | |
| 47 | write.table(as.double(res$rho), paste(testFolder,"rho",sep=""), row.names=F, col.names=F) | |
| 48 | write.table(as.double(res$pi), paste(testFolder,"pi",sep=""), row.names=F, col.names=F) | |
| f1b906da | 49 | } |