From: Benjamin Auder Date: Tue, 29 May 2018 13:18:15 +0000 (+0200) Subject: fit CRAN rules X-Git-Url: https://git.auder.net/variants/Chakart/css/doc/pieces/index.css?a=commitdiff_plain;h=80be0d77f9875256ee3cde0471a7e4bca876893a;p=morpheus.git fit CRAN rules --- diff --git a/pkg/DESCRIPTION b/pkg/DESCRIPTION index 5999b58..98c76d7 100644 --- a/pkg/DESCRIPTION +++ b/pkg/DESCRIPTION @@ -1,10 +1,10 @@ Package: morpheus Title: Estimate Parameters of Mixtures of Logistic Regressions -Description: Mixture of lOgistic Regressions Parameters (H)Estimation with - (U)Spectral methods. The main methods take d-dimensional inputs and a vector +Description: Mixture of logistic regressions parameters (H)estimation with + (U)spectral methods. The main methods take d-dimensional inputs and a vector of binary outputs, and return parameters according to the GLMs mixture model (General Linear Model). For more details see chapter 3 in the PhD thesis of - Mor-Absa Loum: http://www.theses.fr/s156435 + Mor-Absa Loum: http://www.theses.fr/s156435. Version: 0.2-0 Author: Benjamin Auder [aut,cre], Mor-Absa Loum [aut] diff --git a/pkg/R/A_NAMESPACE.R b/pkg/R/A_NAMESPACE.R index 0a45138..ab9ea34 100644 --- a/pkg/R/A_NAMESPACE.R +++ b/pkg/R/A_NAMESPACE.R @@ -1,6 +1,6 @@ #' @include utils.R #' -#' @useDynLib morpheus +#' @useDynLib morpheus, .registration = TRUE #' #' @importFrom jointDiag ajd #' @importFrom stats rbinom rmultinom rnorm pnorm runif integrate sd diff --git a/pkg/src/morpheus_init.c b/pkg/src/morpheus_init.c new file mode 100644 index 0000000..0777777 --- /dev/null +++ b/pkg/src/morpheus_init.c @@ -0,0 +1,25 @@ +#include // for NULL +#include + +/* FIXME: + Check these declarations against the C/Fortran source code. +*/ + +/* .C calls */ +extern void hungarianAlgorithm(void *, void *, void *); +extern void Moments_M2(void *, void *, void *, void *, void *); +extern void Moments_M3(void *, void *, void *, void *, void *); + +static const R_CMethodDef CEntries[] = { + {"hungarianAlgorithm", (DL_FUNC) &hungarianAlgorithm, 3}, + {"Moments_M2", (DL_FUNC) &Moments_M2, 5}, + {"Moments_M3", (DL_FUNC) &Moments_M3, 5}, + {NULL, NULL, 0} +}; + +void R_init_morpheus(DllInfo *dll) +{ + R_registerRoutines(dll, CEntries, NULL, NULL, NULL); + R_useDynamicSymbols(dll, FALSE); +} +