- optimBeta <- function(N, n, K, p, beta, b, link, ncores)
+ optimBeta <- function(N, n, K, p, beta, b, link, weights, ncores)
{
library(morpheus)
res <- multiRun(
- list(n=n, p=p, beta=beta, b=b, optargs=list(K=K, link=link)),
+ list(n=n, p=p, beta=beta, b=b, optargs=list(K=K, link=link, weights=weights)),
list(
# morpheus
function(fargs) {
mu <- computeMu(fargs$X, fargs$Y, fargs$optargs)
res2 <- NULL
tryCatch({
- op <- optimParams(K,link,fargs$optargs)
+ op <- optimParams(K,fargs$optargs$link,fargs$optargs)
x_init <- list(p=rep(1/K,K-1), beta=mu, b=rep(0,K))
res2 <- do.call(rbind, op$run(x_init))
}, error = function(e) {
d <- 2
n <- 1e4
ncores <- 1
+ weights <- c(1,1,1)
cmd_args <- commandArgs()
for (arg in cmd_args)
d <- as.integer(spl[2])
} else if (spl[1] == "link") {
link <- spl[2]
+ } else if (spl[1] == "weights") {
+ weights <- unlist(strsplit(spl[2], ","))
}
}
}
beta <- matrix( c(1,2,-1,0,3,4,-1,-3,0,2,2,-3,0,1,0,-1,-4,3,2,0, -1,1,3,-1,0,0,2,0,1,-2,1,2,-1,0,3,4,-1,-3,0,2, 2,-3,0,1,0,-1,-4,3,2,0,1,1,2,2,-2,-2,3,1,0,0), ncol=K )
}
- mr <- optimBeta(N, n, K, p, beta, b, link, ncores)
+ mr <- optimBeta(N, n, K, p, beta, b, link, weights, ncores)
mr_params <- list("N"=N, "n"=n, "K"=K, "d"=d, "link"=link,
- "p"=c(p,1-sum(p)), "beta"=beta, "b"=b)
+ "p"=c(p,1-sum(p)), "beta"=beta, "b"=b, "weights"=weights)
save("mr", "mr_params", file=paste("multirun_",n,"_",d,"_",link,".RData",sep=""))