| 1 | generateRunSaveTest_constructionModelesLassoRank = function(n=200, p=15, m=10, L=12, mini=5, maxi=10, gamma=1.0, rangmin=3, rangmax=6){ |
| 2 | testFolder = "data/" |
| 3 | dir.create(testFolder, showWarnings=FALSE, mode="0755") |
| 4 | delimiter = " " |
| 5 | |
| 6 | tau = 1e-6 |
| 7 | |
| 8 | |
| 9 | pi = matrix(0, k,L) |
| 10 | for(i in 1:L){ |
| 11 | pi[,i] = rep(1.0/k, k) |
| 12 | } |
| 13 | rho = array(0, dim=c(m,m,k,L)) |
| 14 | for(l in 1:L){ |
| 15 | for(r in 1:k){ |
| 16 | rho[,,r,l] = diag(1,m) |
| 17 | } |
| 18 | } |
| 19 | #Generate X and Y |
| 20 | require(valse) |
| 21 | generateIOdef = valse:::generateIOdefault(n, p, m, k) |
| 22 | |
| 23 | A1 = matrix(0,p,L) |
| 24 | for(i in 1:L){ |
| 25 | A1[,i] = seq(1,p) |
| 26 | } |
| 27 | #save inputs |
| 28 | write.table(paste(testFolder,"rho",sep=""), rho, sep=delimiter) |
| 29 | write.table(paste(testFolder,"pi",sep=""), pi, sep=delimiter) |
| 30 | write.table(paste(testFolder,"mini",sep=""), mini, sep=delimiter) |
| 31 | write.table(paste(testFolder,"maxi",sep=""), maxi, sep=delimiter) |
| 32 | write.table(paste(testFolder,"X",sep=""), generateIOdef$X sep=delimiter) |
| 33 | write.table(paste(testFolder,"Y",sep=""), generateIOdef$Y, sep=delimiter) |
| 34 | write.table(paste(testFolder,"tau",sep=""), tau, sep=delimiter) |
| 35 | write.table(paste(testFolder,"A1",sep=""), A1, sep=delimiter) |
| 36 | write.table(paste(testFolder,"rangmin",sep=""), rangmin, sep=delimiter) |
| 37 | write.table(paste(testFolder,"rangmax",sep=""), rangmax, sep=delimiter) |
| 38 | write.table(paste(testFolder,"dimensions",sep=""), c(n,p,m,k), sep=delimiter) |
| 39 | |
| 40 | construct = constructionModelesLassoRank(pi,rho,mini,maxi,X,Y,tau,A1,rangmin,rangmax)) |
| 41 | |
| 42 | #save output |
| 43 | write.table(paste(testFolder,"phi",sep=""), construct$phi, sep=delimiter) |
| 44 | write.table(paste(testFolder,"lvraisemblance",sep=""), construct$lvraisemblance, sep=delimiter) |
| 45 | |
| 46 | } |