+++ /dev/null
-context("Check that computeFilaments behaves as expected")
-
-#shorthand: map 1->1, 2->2, 3->3, 4->1, ..., 149->2, 150->3
-I = function(i)
- (i-1) %% 3 + 1
-
-#MOCK data; NOTE: could be in inst/testdata as well
-getDataTest = function(n)
-{
- data = Data$new()
- x = seq(0,10,0.1)
- L = length(x)
- s1 = cos(x)
- s2 = sin(x)
- s3 = c( s1[1:(L%/%2)] , s2[(L%/%2+1):L] )
- #sum((s1-s2)^2) == 97.59381
- #sum((s1-s3)^2) == 57.03051
- #sum((s2-s3)^2) == 40.5633
- s = list( s1, s2, s3 )
- series = list()
- for (i in seq_len(n))
- {
- serie = s[[I(i)]] + rnorm(L,sd=0.01)
- level = mean(serie)
- serie = serie - level
- # 10 series with NAs for index 2
- if (I(i) == 2 && i >= 60 && i<= 90)
- serie[sample(seq_len(L),1)] = NA
- data$append(c(), serie, level, c(), c()) #no need for more
- }
- data
-}
-
-test_that("output is as expected on simulated series",
-{
- data = getDataTest(150)
-
- # index 143 : serie type 2
- f = computeFilaments(data, 143, limit=60, plot=FALSE)
- # Expected output: 23 series of type 3 (closer), then 50-3-10 series of type 2, then 143
- expect_identical(length(f$indices), as.integer(61)) #61 because result also contain today
- expect_identical(length(f$colors), as.integer(61))
- expect_true(all(I(f$indices) >= 2))
- for (i in 1:23)
- {
- expect_equal(I(f$indices[i]), 3)
- expect_match(f$colors[i], f$colors[1])
- }
- for (i in 24:60)
- {
- expect_equal(I(f$indices[i]), 2)
- expect_match(f$colors[i], f$colors[24])
- }
- expect_equal(f$indices[61], 143)
- expect_match(f$colors[61], "#FF0000") #special color: current day in red
- expect_match(f$colors[1], "#E*")
- expect_match(f$colors[24], "#1*")
-
- # index 142 : serie type 1
- f = computeFilaments(data, 142, limit=50, plot=FALSE)
- # Expected output: 13 series of type 3 (closer), then 50-10-3 series of type 1, then 142
- # NOTE: -10 because only past days with no-NAs tomorrow => exclude type 1 in [60,90[
- expect_identical(length(f$indices), as.integer(51))
- expect_identical(length(f$colors), as.integer(51))
- expect_true(all(I(f$indices) != 2))
- for (i in 1:13)
- {
- expect_equal(I(f$indices[i]), 3)
- expect_match(f$colors[i], f$colors[1])
- }
- for (i in 14:50)
- {
- expect_equal(I(f$indices[i]), 1)
- expect_match(f$colors[i], f$colors[14])
- }
- expect_equal(f$indices[51], 142)
- expect_match(f$colors[51], "#FF0000")
- expect_match(f$colors[1], "#E*")
- expect_match(f$colors[14], "#1*")
-})