| 1 | generateRunSaveTest_EMGLLF = function(n=200, p=15, m=10, k=3, mini=5, maxi=10, |
| 2 | gamma=1., lambda=0.5, tau=1e-6) |
| 3 | { |
| 4 | testFolder = "data/" |
| 5 | dir.create(testFolder, showWarnings=FALSE, mode="0755") |
| 6 | delimiter = " " |
| 7 | |
| 8 | #save inputs |
| 9 | require(valse) |
| 10 | params = valse:::basic_Init_Parameters(n, p, m, k) |
| 11 | io = generateIOdefault(n, p, m, k) |
| 12 | write.table(paste(testFolder,"phiInit",sep=""), params$phiInit, sep=delimiter); |
| 13 | write.table(paste(testFolder,"rhoInit",sep=""), params$rhoInit, sep=delimiter); |
| 14 | write.table(paste(testFolder,"piInit",sep=""), params$piInit, sep=delimiter); |
| 15 | write.table(paste(testFolder,"gamInit",sep=""), params$gamInit, sep=delimiter); |
| 16 | write.table(paste(testFolder,"mini",sep=""), mini, sep=delimiter); |
| 17 | write.table(paste(testFolder,"maxi",sep=""), maxi, sep=delimiter); |
| 18 | write.table(paste(testFolder,"gamma",sep=""), gamma, sep=delimiter); |
| 19 | write.table(paste(testFolder,"lambda",sep=""), lambda, sep=delimiter); |
| 20 | write.table(paste(testFolder,"X",sep=""), io$X, sep=delimiter); |
| 21 | write.table(paste(testFolder,"Y",sep=""), io$Y, sep=delimiter); |
| 22 | write.table(paste(testFolder,"tau",sep=""), tau, sep=delimiter); |
| 23 | write.table(paste(testFolder,"dimensions",sep=""), c(n,p,m,k), sep=delimiter); |
| 24 | |
| 25 | res = EMGLLF(params$phiInit,params$rhoInit,params$piInit,params$gamInit,mini,maxi, |
| 26 | gamma,lambda,io$X,io$Y,tau); |
| 27 | |
| 28 | #save outputs |
| 29 | write.table(paste(testFolder,"phi",sep=""), res$phi, sep=delimiter); |
| 30 | write.table(paste(testFolder,"rho",sep=""), res$rho, sep=delimiter); |
| 31 | write.table(paste(testFolder,"pi",sep=""), res$pi, sep=delimiter); |
| 32 | write.table(paste(testFolder,"LLF",sep=""), res$LLF, sep=delimiter); |
| 33 | write.table(paste(testFolder,"S",sep=""), res$S, sep=delimiter); |
| 34 | } |