| 1 | generateRunSaveTest_constructionModelesLassoRank = function(n=200, p=15, m=10, L=12, mini=5, |
| 2 | maxi=10, gamma=1.0, rangmin=3, rangmax=6) |
| 3 | { |
| 4 | testFolder = "data/" |
| 5 | dir.create(testFolder, showWarnings=FALSE, mode="0755") |
| 6 | |
| 7 | tau = 1e-6 |
| 8 | pi = matrix(0, k,L) |
| 9 | for(i in 1:L){ |
| 10 | pi[,i] = rep(1.0/k, k) |
| 11 | } |
| 12 | rho = array(0, dim=c(m,m,k,L)) |
| 13 | for(l in 1:L){ |
| 14 | for(r in 1:k){ |
| 15 | rho[,,r,l] = diag(1,m) |
| 16 | } |
| 17 | } |
| 18 | require(valse) |
| 19 | io = valse:::generateIOdefault(n, p, m, k) |
| 20 | A1 = matrix(0,p,L) |
| 21 | for(i in 1:L){ |
| 22 | A1[,i] = seq(1,p) |
| 23 | } |
| 24 | |
| 25 | #save inputs |
| 26 | write.table(as.double(rho),paste(testFolder,"rho",sep=""), |
| 27 | row.names=F, col.names=F) |
| 28 | write.table(as.double(pi), paste(testFolder,"pi",sep=""), |
| 29 | row.names=F, col.names=F) |
| 30 | write.table(as.integer(mini), paste(testFolder,"mini",sep=""), |
| 31 | row.names=F, col.names=F) |
| 32 | write.table(as.integer(maxi), paste(testFolder,"maxi",sep=""), |
| 33 | row.names=F, col.names=F) |
| 34 | write.table(as.double(io$X), paste(testFolder,"X",sep=""), |
| 35 | row.names=F, col.names=F) |
| 36 | write.table(as.double(io$Y), paste(testFolder,"Y",sep=""), |
| 37 | row.names=F, col.names=F) |
| 38 | write.table(as.double(tau),paste(testFolder,"tau",sep=""), |
| 39 | row.names=F, col.names=F) |
| 40 | write.table(as.double(A1),paste(testFolder,"A1",sep=""), |
| 41 | row.names=F, col.names=F) |
| 42 | write.table(as.integer(rangmin),paste(testFolder,"rangmin",sep=""), |
| 43 | row.names=F, col.names=F) |
| 44 | write.table(as.integer(rangmax),paste(testFolder,"rangmax",sep=""), |
| 45 | row.names=F, col.names=F) |
| 46 | write.table(as.integer(c(n,p,m,k)),paste(testFolder,"dimensions",sep=""), |
| 47 | row.names=F, col.names=F) |
| 48 | |
| 49 | res = constructionModelesLassoRank(pi,rho,mini,maxi,X,Y,tau,A1,rangmin,rangmax) |
| 50 | |
| 51 | #save output |
| 52 | write.table(as.double(res$phi), paste(testFolder,"phi",sep=""), row.names=F, col.names=F) |
| 53 | write.table(as.double(res$llh), paste(testFolder,"llh",sep=""), row.names=F, col.names=F) |
| 54 | } |