generateRunSaveTest_selectiontotale= function(n=200, p=15, m=10, k=3, mini=5, maxi=10, gamma=1.0,
glambda=list(0.0,0.01,0.02,0.03,0.05,0.1,0.2,0.3,0.5,0.7,0.85,0.99))
{
- testFolder = "data/"
- dir.create(testFolder, showWarnings=FALSE, mode="0755")
-
+ tau = 1e-6;
+ seuil = 1e-15;
require(valse)
- params = valse:::basic_Init_Parameters(n, p, m, k)
- io = valse:::generateIOdefault(n, p, m, k)
+ params = valse:::basicInitParameters(n, p, m, k)
+ xy = valse:::generateXYdefault(n, p, m, k)
+ L = length(glambda)
+ testFolder = "data/"
+ dir.create(testFolder, showWarnings=FALSE, mode="0755")
#save inputs
write.table(as.double(params$phiInit), paste(testFolder,"phiInit",sep=""),
row.names=F, col.names=F)
row.names=F, col.names=F)
write.table(as.double(glambda), paste(testFolder,"lambda",sep=""),
row.names=F, col.names=F)
- write.table(as.double(io$X), paste(testFolder,"X",sep=""),
+ write.table(as.double(xy$X), paste(testFolder,"X",sep=""),
+ row.names=F, col.names=F)
+ write.table(as.double(xy$Y), paste(testFolder,"Y",sep=""),
row.names=F, col.names=F)
- write.table(as.double(io$Y), paste(testFolder,"Y",sep=""),
+ write.table(as.double(seuil), paste(testFolder,"seuil",sep=""),
row.names=F, col.names=F)
write.table(as.double(tau), paste(testFolder,"tau",sep=""),
row.names=F, col.names=F)
- write.table(as.integer(c(n,p,m,k)), paste(testFolder,"dimensions",sep=""),
+ write.table(as.integer(c(n,p,m,k,L)), paste(testFolder,"dimensions",sep=""),
row.names=F, col.names=F)
res = selectiontotale(params$phiInit,params$rhoInit,params$piInit,params$gamInit,
- mini,maxi,gamma,glambda,io$X,io$Y,seuil, tau)
+ mini,maxi,gamma,glambda,xy$X,xy$Y,seuil, tau)
#save output
write.table(as.double(res$A1), paste(testFolder,"A1",sep=""), row.names=F, col.names=F)