X-Git-Url: https://git.auder.net/images/pieces/%22%20%20%20VariantRules.getPpath%28board%5Bi%5D%5Bj%5D%29%20%20%20%22.svg?a=blobdiff_plain;f=src%2Ftest%2Fgenerate_test_data%2FgenerateRunSaveTest_EMGrank.R;h=99da9bc3a9b6161e35d320650d458b1d9c4fdda0;hb=53fa233d8fbeaf4d51a4874ba69d8472d01d04ba;hp=a690cf5c6ad59f08b6f69c3bbf08e7e48de2a2d7;hpb=ef67d338c7f28ba041abe40ca9a8ab69f8365a90;p=valse.git diff --git a/src/test/generate_test_data/generateRunSaveTest_EMGrank.R b/src/test/generate_test_data/generateRunSaveTest_EMGrank.R index a690cf5..99da9bc 100644 --- a/src/test/generate_test_data/generateRunSaveTest_EMGrank.R +++ b/src/test/generate_test_data/generateRunSaveTest_EMGrank.R @@ -1,3 +1,5 @@ +source("EMGrank.R") + generateRunSaveTest_EMGrank = function(n=200, p=15, m=10, k=3, mini=5, maxi=10, gamma=1.0, rank = c(1,2,4)) { @@ -9,7 +11,7 @@ generateRunSaveTest_EMGrank = function(n=200, p=15, m=10, k=3, mini=5, maxi=10, require(valse) xy = valse:::generateXYdefault(n, p, m, k) - testFolder = "data/" + testFolder = "../data/" dir.create(testFolder, showWarnings=FALSE, mode="0755") #save inputs write.table(as.double(rho), paste(testFolder,"rho",sep=""), @@ -28,7 +30,7 @@ generateRunSaveTest_EMGrank = function(n=200, p=15, m=10, k=3, mini=5, maxi=10, row.names=F, col.names=F) write.table(as.integer(rank), paste(testFolder,"rank",sep=""), row.names=F, col.names=F) - write.table(as.integer(c(n,p,m,k)), paste(testFolder,"dimensxyns",sep=""), + write.table(as.integer(c(n,p,m,k)), paste(testFolder,"dimensions",sep=""), row.names=F, col.names=F) res = EMGrank(pi,rho,mini,maxi,xy$X,xy$Y,tau,rank)