dir.create(testFolder, showWarnings=FALSE, mode="0755")
require(valse)
- params = valse:::basicInitParameters(n, p, m, k)
- xy = valse:::generateXYdefault(n, p, m, k)
+ params = basicInitParameters(n, p, m, k)
+ xy = generateXYdefault(n, p, m, k)
#save inputs
write.table(as.double(params$phiInit), paste(testFolder,"phiInit",sep=""),
write.table(as.double(res$phi), paste(testFolder,"phi",sep=""), row.names=F, col.names=F)
write.table(as.double(res$rho), paste(testFolder,"rho",sep=""), row.names=F, col.names=F)
write.table(as.double(res$pi), paste(testFolder,"pi",sep=""), row.names=F, col.names=F)
- write.table(as.double(res$LLF), paste(testFolder,"LLF",sep=""), row.names=F, col.names=F)
+ write.table(as.double(res$llh), paste(testFolder,"llh",sep=""), row.names=F, col.names=F)
write.table(as.double(res$S), paste(testFolder,"S",sep=""), row.names=F, col.names=F)
write.table(as.integer(res$affec), paste(testFolder,"affec",sep=""), row.names=F, col.names=F)
}