From: emilie <emilie@devijver.org>
Date: Wed, 19 Apr 2017 11:46:17 +0000 (+0200)
Subject: fix few things
X-Git-Url: https://git.auder.net/doc/current/%7B%7B%20path%28%27fos_user_security_logout%27%29%20%7D%7D?a=commitdiff_plain;h=96b591b7a76da9780e766ead693eb065281b6d62;p=valse.git

fix few things
---

diff --git a/pkg/R/EMGrank.R b/pkg/R/EMGrank.R
index db40948..db0b8f2 100644
--- a/pkg/R/EMGrank.R
+++ b/pkg/R/EMGrank.R
@@ -73,8 +73,8 @@ matricize <- function(X)
       if (length(Z_indice) == 0) 
         next
       # U,S,V = SVD of (t(Xr)Xr)^{-1} * t(Xr) * Yr
-      s <- svd(MASS::ginv(crossprod(matricize(X[Z_indice, ])))
-        %*% crossprod(matricize(X[Z_indice, ]), matricize(Y[Z_indice, ])))
+      s <- svd(MASS::ginv(crossprod(matricize(X[Z_indice, ]))) %*% 
+                 crossprod(matricize(X[Z_indice, ]), matricize(Y[Z_indice, ])))
       S <- s$d
       # Set m-rank(r) singular values to zero, and recompose best rank(r) approximation
       # of the initial product
diff --git a/pkg/R/constructionModelesLassoMLE.R b/pkg/R/constructionModelesLassoMLE.R
index 4f23bb0..8f93fb8 100644
--- a/pkg/R/constructionModelesLassoMLE.R
+++ b/pkg/R/constructionModelesLassoMLE.R
@@ -71,8 +71,8 @@ constructionModelesLassoMLE <- function(phiInit, rhoInit, piInit, gamInit, mini,
       {
         delta <- (Y %*% rhoLambda[, , r] - (X[, col.sel] %*% t(phiLambda[col.sel, , r])))
       } else delta <- (Y %*% rhoLambda[, , r] - (X[, col.sel] %*% phiLambda[col.sel, , r]))
-      densite <- densite + piLambda[r] * det(rhoLambda[, , r])/(sqrt(2 * base::pi))^m
-        * exp(-diag(tcrossprod(delta))/2)
+      densite <- densite + piLambda[r] * det(rhoLambda[, , r])/(sqrt(2 * base::pi))^m * 
+        exp(-diag(tcrossprod(delta))/2)
     }
     llhLambda <- c(sum(log(densite)), (dimension + m + 1) * k - 1)
     list(phi = phiLambda, rho = rhoLambda, pi = piLambda, llh = llhLambda)
diff --git a/pkg/R/initSmallEM.R b/pkg/R/initSmallEM.R
index d1ade1c..ba95586 100644
--- a/pkg/R/initSmallEM.R
+++ b/pkg/R/initSmallEM.R
@@ -54,8 +54,8 @@ initSmallEM <- function(k, X, Y, fast = TRUE)
       {
         dotProduct <- tcrossprod(Y[i, ] %*% rhoInit1[, , r, repet]
           - X[i, ] %*% phiInit1[, , r, repet])
-        Gam[i, r] <- piInit1[repet, r]
-          * det(rhoInit1[, , r, repet]) * exp(-0.5 * dotProduct)
+        Gam[i, r] <- piInit1[repet, r] * 
+          det(rhoInit1[, , r, repet]) * exp(-0.5 * dotProduct)
       }
       sumGamI <- sum(Gam[i, ])
       gamInit1[i, , repet] <- Gam[i, ]/sumGamI