source("helper.R")
+library(valse)
generateRunSaveTest_EMGLLF = function(n=200, p=15, m=10, k=3, mini=5, maxi=10,
gamma=1., lambda=0.5, tau=1e-6)
testFolder = "../data/"
dir.create(testFolder, showWarnings=FALSE, mode="0755")
- require(valse)
params = basicInitParameters(n, p, m, k)
xy = generateXYdefault(n, p, m, k)
write.table(as.integer(c(n,p,m,k)), paste(testFolder,"dimensions",sep=""),
row.names=F, col.names=F)
- res = EMGLLF_R(params$phiInit,params$rhoInit,params$piInit,params$gamInit,mini,maxi,
- gamma,lambda,xy$X,xy$Y,tau)
+ res = valse::EMGLLF(params$phiInit,params$rhoInit,params$piInit,params$gamInit,mini,
+ maxi,gamma,lambda,xy$X,xy$Y,tau,fast=FALSE)
#save outputs
- write.table(as.double(res$phi), paste(testFolder,"phi",sep=""), row.names=F, col.names=F)
- write.table(as.double(res$rho), paste(testFolder,"rho",sep=""), row.names=F, col.names=F)
- write.table(as.double(res$pi), paste(testFolder,"pi",sep=""), row.names=F, col.names=F)
- write.table(as.double(res$llh), paste(testFolder,"llh",sep=""), row.names=F, col.names=F)
- write.table(as.double(res$S), paste(testFolder,"S",sep=""), row.names=F, col.names=F)
- write.table(as.integer(res$affec), paste(testFolder,"affec",sep=""), row.names=F, col.names=F)
+ write.table(as.double(res$phi),paste(testFolder,"phi",sep=""),row.names=F,col.names=F)
+ write.table(as.double(res$rho),paste(testFolder,"rho",sep=""),row.names=F,col.names=F)
+ write.table(as.double(res$pi),paste(testFolder,"pi",sep=""),row.names=F,col.names=F)
+ write.table(as.double(res$llh),paste(testFolder,"llh",sep=""),row.names=F,col.names=F)
+ write.table(as.double(res$S),paste(testFolder,"S",sep=""),row.names=F,col.names=F)
+ write.table(as.integer(res$affec),paste(testFolder,"affec",sep=""),row.names=F,col.names=F)
}