X-Git-Url: https://git.auder.net/?p=valse.git;a=blobdiff_plain;f=pkg%2Fsrc%2Fadapters%2Fa.EMGrank.c;fp=pkg%2Fsrc%2Fadapters%2Fa.EMGrank.c;h=0000000000000000000000000000000000000000;hp=b1dad9ba5b02c15f93f9f943d876eb4c24468803;hb=e32621012b1660204434a56acc8cf73eac42f477;hpb=ca277ac5ab51fef149014eb5e4610403fdb3227b

diff --git a/pkg/src/adapters/a.EMGrank.c b/pkg/src/adapters/a.EMGrank.c
deleted file mode 100644
index b1dad9b..0000000
--- a/pkg/src/adapters/a.EMGrank.c
+++ /dev/null
@@ -1,73 +0,0 @@
-#include <R.h>
-#include <Rdefines.h>
-#include "EMGrank.h"
-
-// See comments in src/sources/EMGrank.c and R/EMGrank.R (wrapper)
-SEXP EMGrank(
-	SEXP Pi_,
-	SEXP Rho_,
-	SEXP mini_,
-	SEXP maxi_,
-	SEXP X_,
-	SEXP Y_,
-	SEXP tau_,
-	SEXP rank_
-) {
-	// Get matrices dimensions
-	SEXP dimX = getAttrib(X_, R_DimSymbol);
-	int n = INTEGER(dimX)[0];
-	int p = INTEGER(dimX)[1];
-	SEXP dimRho = getAttrib(Rho_, R_DimSymbol);
-	int m = INTEGER(dimRho)[0];
-	int k = INTEGER(dimRho)[2];
-
-	////////////
-	// INPUTS //
-	////////////
-
-	// get scalar parameters
-	int mini = INTEGER_VALUE(mini_);
-	int maxi = INTEGER_VALUE(maxi_);
-	double tau = NUMERIC_VALUE(tau_);
-
-	// Get pointers from SEXP arrays ; WARNING: by columns !
-	double* Pi = REAL(Pi_);
-	double* Rho = REAL(Rho_);
-	double* X = REAL(X_);
-	double* Y = REAL(Y_);
-	int* rank = INTEGER(rank_);
-
-	/////////////
-	// OUTPUTS //
-	/////////////
-
-	SEXP phi, LLF, dimPhi;
-	PROTECT(dimPhi = allocVector(INTSXP, 3));
-	int* pDimPhi = INTEGER(dimPhi);
-	pDimPhi[0] = p; pDimPhi[1] = m; pDimPhi[2] = k;
-	PROTECT(phi = allocArray(REALSXP, dimPhi));
-	PROTECT(LLF = allocVector(REALSXP, 1));
-	double *pPhi=REAL(phi), *pLLF=REAL(LLF);
-
-	/////////////////////
-	// Call to EMGrank //
-	/////////////////////
-
-	EMGrank_core(Pi, Rho, mini, maxi, X, Y, tau, rank,
-		pPhi,pLLF,
-		n,p,m,k);
-
-	// Build list from OUT params and return it
-	SEXP listParams, listNames;
-	PROTECT(listParams = allocVector(VECSXP, 2));
-	char* lnames[2] = {"phi", "LLF"}; //lists labels
-	PROTECT(listNames = allocVector(STRSXP,2));
-	for (int i=0; i<2; i++)
-		SET_STRING_ELT(listNames,i,mkChar(lnames[i]));
-	setAttrib(listParams, R_NamesSymbol, listNames);
-	SET_VECTOR_ELT(listParams, 0, phi);
-	SET_VECTOR_ELT(listParams, 1, LLF);
-
-	UNPROTECT(5);
-	return listParams;
-}