X-Git-Url: https://git.auder.net/?p=valse.git;a=blobdiff_plain;f=pkg%2FR%2FconstructionModelesLassoMLE.R;h=d2a16bc0f40a3e7e9f679035fd3404e0912448d8;hp=16f58b62c237ca5ea0412fb36a0906ce85c3697c;hb=923ed737d0fa335b858204b813c964432488abbe;hpb=f7ac8e154ed78624db1a9992adb5576cae499989 diff --git a/pkg/R/constructionModelesLassoMLE.R b/pkg/R/constructionModelesLassoMLE.R index 16f58b6..d2a16bc 100644 --- a/pkg/R/constructionModelesLassoMLE.R +++ b/pkg/R/constructionModelesLassoMLE.R @@ -63,25 +63,39 @@ constructionModelesLassoMLE <- function(phiInit, rhoInit, piInit, gamInit, mini, phiLambda[col.sel[j], sel.lambda[[j]], ] <- phiLambda2[j, sel.lambda[[j]], ] dimension <- length(unlist(sel.lambda)) - ## Computation of the loglikelihood - # Precompute det(rhoLambda[,,r]) for r in 1...k - detRho <- sapply(1:k, function(r) gdet(rhoLambda[, , r])) - sumLogLLH <- 0 + ## Affectations + Gam <- matrix(0, ncol = length(piLambda), nrow = n) for (i in 1:n) { - # Update gam[,]; use log to avoid numerical problems - logGam <- sapply(1:k, function(r) { - log(piLambda[r]) + log(detRho[r]) - 0.5 * - sum((Y[i, ] %*% rhoLambda[, , r] - X[i, ] %*% phiLambda[, , r])^2) - }) - - logGam <- logGam - max(logGam) #adjust without changing proportions - gam <- exp(logGam) - norm_fact <- sum(gam) - sumLogLLH <- sumLogLLH + log(norm_fact) - log((2 * base::pi)^(m/2)) + for (r in 1:length(piLambda)) + { + sqNorm2 <- sum((Y[i, ] %*% rhoLambda[, , r] - X[i, ] %*% phiLambda[, , r])^2) + Gam[i, r] <- piLambda[r] * exp(-0.5 * sqNorm2) * det(rhoLambda[, , r]) + } } - llhLambda <- c(-sumLogLLH/n, (dimension + m + 1) * k - 1) - list(phi = phiLambda, rho = rhoLambda, pi = piLambda, llh = llhLambda) + Gam2 <- Gam/rowSums(Gam) + affec <- apply(Gam2, 1, which.max) + proba <- Gam2 + LLH <- c(sum(log(apply(Gam,1,sum))), (dimension + m + 1) * k - 1) + # ## Computation of the loglikelihood + # # Precompute det(rhoLambda[,,r]) for r in 1...k + # detRho <- sapply(1:k, function(r) gdet(rhoLambda[, , r])) + # sumLogLLH <- 0 + # for (i in 1:n) + # { + # # Update gam[,]; use log to avoid numerical problems + # logGam <- sapply(1:k, function(r) { + # log(piLambda[r]) + log(detRho[r]) - 0.5 * + # sum((Y[i, ] %*% rhoLambda[, , r] - X[i, ] %*% phiLambda[, , r])^2) + # }) + # + # #logGam <- logGam - max(logGam) #adjust without changing proportions -> change the LLH + # gam <- exp(logGam) + # norm_fact <- sum(gam) + # sumLogLLH <- sumLogLLH + log(norm_fact) - m/2* log(2 * base::pi) + # } + #llhLambda <- c(-sumLogLLH/n, (dimension + m + 1) * k - 1) + list(phi = phiLambda, rho = rhoLambda, pi = piLambda, llh = LLH, affec = affec, proba = proba) } # For each lambda, computation of the parameters