essai fusion

[valse.git] / pkg / src / adapters / a.EMGrank.c

diff --git a/pkg/src/adapters/a.EMGrank.c b/pkg/src/adapters/a.EMGrank.c
deleted file mode 100644 (file)
index b1dad9b..0000000
--- a/pkg/src/adapters/a.EMGrank.c
+++ /dev/null
@@ -1,73 +0,0 @@
-#include <R.h>
-#include <Rdefines.h>
-#include "EMGrank.h"
-
-// See comments in src/sources/EMGrank.c and R/EMGrank.R (wrapper)
-SEXP EMGrank(
-       SEXP Pi_,
-       SEXP Rho_,
-       SEXP mini_,
-       SEXP maxi_,
-       SEXP X_,
-       SEXP Y_,
-       SEXP tau_,
-       SEXP rank_
-) {
-       // Get matrices dimensions
-       SEXP dimX = getAttrib(X_, R_DimSymbol);
-       int n = INTEGER(dimX)[0];
-       int p = INTEGER(dimX)[1];
-       SEXP dimRho = getAttrib(Rho_, R_DimSymbol);
-       int m = INTEGER(dimRho)[0];
-       int k = INTEGER(dimRho)[2];
-
-       ////////////
-       // INPUTS //
-       ////////////
-
-       // get scalar parameters
-       int mini = INTEGER_VALUE(mini_);
-       int maxi = INTEGER_VALUE(maxi_);
-       double tau = NUMERIC_VALUE(tau_);
-
-       // Get pointers from SEXP arrays ; WARNING: by columns !
-       double* Pi = REAL(Pi_);
-       double* Rho = REAL(Rho_);
-       double* X = REAL(X_);
-       double* Y = REAL(Y_);
-       int* rank = INTEGER(rank_);
-
-       /////////////
-       // OUTPUTS //
-       /////////////
-
-       SEXP phi, LLF, dimPhi;
-       PROTECT(dimPhi = allocVector(INTSXP, 3));
-       int* pDimPhi = INTEGER(dimPhi);
-       pDimPhi[0] = p; pDimPhi[1] = m; pDimPhi[2] = k;
-       PROTECT(phi = allocArray(REALSXP, dimPhi));
-       PROTECT(LLF = allocVector(REALSXP, 1));
-       double *pPhi=REAL(phi), *pLLF=REAL(LLF);
-
-       /////////////////////
-       // Call to EMGrank //
-       /////////////////////
-
-       EMGrank_core(Pi, Rho, mini, maxi, X, Y, tau, rank,
-               pPhi,pLLF,
-               n,p,m,k);
-
-       // Build list from OUT params and return it
-       SEXP listParams, listNames;
-       PROTECT(listParams = allocVector(VECSXP, 2));
-       char* lnames[2] = {"phi", "LLF"}; //lists labels
-       PROTECT(listNames = allocVector(STRSXP,2));
-       for (int i=0; i<2; i++)
-               SET_STRING_ELT(listNames,i,mkChar(lnames[i]));
-       setAttrib(listParams, R_NamesSymbol, listNames);
-       SET_VECTOR_ELT(listParams, 0, phi);
-       SET_VECTOR_ELT(listParams, 1, LLF);
-
-       UNPROTECT(5);
-       return listParams;
-}