source("EMGLLF.R") generateRunSaveTest_EMGLLF = function(n=200, p=15, m=10, k=3, mini=5, maxi=10, gamma=1., lambda=0.5, tau=1e-6) { testFolder = "../data/" dir.create(testFolder, showWarnings=FALSE, mode="0755") require(valse) params = valse:::basicInitParameters(n, p, m, k) xy = valse:::generateXYdefault(n, p, m, k) #save inputs write.table(as.double(params$phiInit), paste(testFolder,"phiInit",sep=""), row.names=F, col.names=F) write.table(as.double(params$rhoInit), paste(testFolder,"rhoInit",sep=""), row.names=F, col.names=F) write.table(as.double(params$piInit), paste(testFolder,"piInit",sep=""), row.names=F, col.names=F) write.table(as.double(params$gamInit), paste(testFolder,"gamInit",sep=""), row.names=F, col.names=F) write.table(as.integer(mini), paste(testFolder,"mini",sep=""), row.names=F, col.names=F) write.table(as.integer(maxi), paste(testFolder,"maxi",sep=""), row.names=F, col.names=F) write.table(as.double(gamma), paste(testFolder,"gamma",sep=""), row.names=F, col.names=F) write.table(as.double(lambda), paste(testFolder,"lambda",sep=""), row.names=F, col.names=F) write.table(as.double(xy$X), paste(testFolder,"X",sep=""), row.names=F, col.names=F) write.table(as.double(xy$Y), paste(testFolder,"Y",sep=""), row.names=F, col.names=F) write.table(as.double(tau), paste(testFolder,"tau",sep=""), row.names=F, col.names=F) write.table(as.integer(c(n,p,m,k)), paste(testFolder,"dimensions",sep=""), row.names=F, col.names=F) res = EMGLLF(params$phiInit,params$rhoInit,params$piInit,params$gamInit,mini,maxi, gamma,lambda,xy$X,xy$Y,tau) #save outputs write.table(as.double(res$phi), paste(testFolder,"phi",sep=""), row.names=F, col.names=F) write.table(as.double(res$rho), paste(testFolder,"rho",sep=""), row.names=F, col.names=F) write.table(as.double(res$pi), paste(testFolder,"pi",sep=""), row.names=F, col.names=F) write.table(as.double(res$LLF), paste(testFolder,"LLF",sep=""), row.names=F, col.names=F) write.table(as.double(res$S), paste(testFolder,"S",sep=""), row.names=F, col.names=F) }