[valse.git] / test / README

#!/bin/sh
set -e

#Testing procedure for EMGLLF (inside this folder):

#0) Install current version of the package
    # Should be library(roxygen2);roxygenize('.'), but roxygen2 6.0.1 bug
    # ==> temporary workaround with devtools + document()
    echo "setwd('../pkg');library(devtools);document()" | R --slave
    R CMD INSTALL ../pkg

#1) Generate data using R versions of EMGLLF/EMGrank (slow, but trusted)
    cd generate_test_data/
    echo -e "source('generateRunSaveTest_EMGLLF.R');\n \
      # I'm happy with default values - feel free to give args\n \
      generateRunSaveTest_EMGLLF() " \
      | R --slave
    cd ..

#2) Compile test C code
    # Next line compile the test into an executable named "test.EMGLLF"
    make test.EMGLLF

#3) Run it!
    # Fingers crossed, hoping everything is alright
    ./test.EMGLLF
    # Ask valgrind (generally better idea ;) )
    #valgrind ./test.EMGLLF

#For EMGrank: same procedure, just change EMGLLF to EMGrank everwhere.
Commit	Line	Data
3f3ed99c	1	#!/bin/sh
3aed37d0	2	set -e
3f3ed99c BA	3
	4	#Testing procedure for EMGLLF (inside this folder):
	5
	6	#0) Install current version of the package
	7	# Should be library(roxygen2);roxygenize('.'), but roxygen2 6.0.1 bug
	8	# ==> temporary workaround with devtools + document()
	9	echo "setwd('../pkg');library(devtools);document()" \| R --slave
	10	R CMD INSTALL ../pkg
	11
	12	#1) Generate data using R versions of EMGLLF/EMGrank (slow, but trusted)
	13	cd generate_test_data/
57f4468e BA	14	echo -e "source('generateRunSaveTest_EMGLLF.R');\n \
	15	# I'm happy with default values - feel free to give args\n \
	16	generateRunSaveTest_EMGLLF() " \
3f3ed99c	17	\| R --slave
923a335e	18	cd ..
3f3ed99c BA	19
3f3ed99c BA	20	#2) Compile test C code
923a335e	21	# Next line compile the test into an executable named "test.EMGLLF"
3f3ed99c BA	22	make test.EMGLLF
	23
	24	#3) Run it!
	25	# Fingers crossed, hoping everything is alright
	26	./test.EMGLLF
923a335e BA	27	# Ask valgrind (generally better idea ;) )
923a335e BA	28	#valgrind ./test.EMGLLF
3f3ed99c BA	29
3f3ed99c BA	30	#For EMGrank: same procedure, just change EMGLLF to EMGrank everwhere.