context("Check that computeFilaments behaves as expected") #shorthand: map 1->1, 2->2, 3->3, 4->1, ..., 149->2, 150->3 I = function(i) (i-1) %% 3 + 1 #MOCK data; NOTE: could be in inst/testdata as well getDataTest = function(n) { data = Data$new() x = seq(0,10,0.1) L = length(x) s1 = cos(x) s2 = sin(x) s3 = c( s1[1:(L%/%2)] , s2[(L%/%2+1):L] ) #sum((s1-s2)^2) == 97.59381 #sum((s1-s3)^2) == 57.03051 #sum((s2-s3)^2) == 40.5633 s = list( s1, s2, s3 ) series = list() for (i in seq_len(n)) { serie = s[[I(i)]] + rnorm(L,sd=0.01) level = mean(serie) serie = serie - level # 10 series with NAs for index 2 if (I(i) == 2 && i >= 60 && i<= 90) serie[sample(seq_len(L),1)] = NA data$append(c(), serie, level, c(), c()) #no need for more } data } test_that("output is as expected on simulated series", { data = getDataTest(150) # index 143 : serie type 2 f = computeFilaments(data, 143, limit=60, plot=FALSE) # Expected output: 23 series of type 3 (closer), then 50-3-10 series of type 2, then 143 expect_identical(length(f$indices), as.integer(61)) #61 because result also contain today expect_identical(length(f$colors), as.integer(61)) expect_true(all(I(f$indices) >= 2)) for (i in 1:23) { expect_equal(I(f$indices[i]), 3) expect_match(f$colors[i], f$colors[1]) } for (i in 24:60) { expect_equal(I(f$indices[i]), 2) expect_match(f$colors[i], f$colors[24]) } expect_equal(f$indices[61], 143) expect_match(f$colors[61], "#FF0000") #special color: current day in red expect_match(f$colors[1], "#E*") expect_match(f$colors[24], "#1*") # index 142 : serie type 1 f = computeFilaments(data, 142, limit=50, plot=FALSE) # Expected output: 13 series of type 3 (closer), then 50-10-3 series of type 1, then 142 # NOTE: -10 because only past days with no-NAs tomorrow => exclude type 1 in [60,90[ expect_identical(length(f$indices), as.integer(51)) expect_identical(length(f$colors), as.integer(51)) expect_true(all(I(f$indices) != 2)) for (i in 1:13) { expect_equal(I(f$indices[i]), 3) expect_match(f$colors[i], f$colors[1]) } for (i in 14:50) { expect_equal(I(f$indices[i]), 1) expect_match(f$colors[i], f$colors[14]) } expect_equal(f$indices[51], 142) expect_match(f$colors[51], "#FF0000") expect_match(f$colors[1], "#E*") expect_match(f$colors[14], "#1*") })