X-Git-Url: https://git.auder.net/?p=morpheus.git;a=blobdiff_plain;f=reports%2FprintResults.R;h=b61084f4e19b93f8724535136c66cee6f97ec79c;hp=a6cac0549b7c9208d1a99d1d75f50a6e67641cfa;hb=07f2d0453144f5b639dcc28f1df40a141db7da79;hpb=38c65767eb0c8c5a7ad6025471f56dbaffc68e6e

diff --git a/reports/printResults.R b/reports/printResults.R
index a6cac05..b61084f 100644
--- a/reports/printResults.R
+++ b/reports/printResults.R
@@ -1,32 +1,42 @@
+# NOTE: discard top 2% of highest values
 prms <- function(name, idx)
 {
   load(name)
   d <- nrow(mr[[1]][[1]])-2
+	if (idx > length(mr))
+		mr[[idx]] = mr[[1]]
   p <- colMeans(do.call(rbind, lapply(mr[[idx]], function(m) m[1,])))
-  b <- colMeans(do.call(rbind, lapply(mr[[idx]], function(m) m[2+d,])))
-  L <- length(mr[[1]])
-  beta <- (1/L) * Reduce("+", lapply(mr[[idx]], function(m) m[2:(d+1),]))
+	bVects <- lapply(mr[[idx]], function(m) m[2+d,])
+	q98 <- quantile(sapply(bVects, function(bv) sum(abs(bv))), 0.98)
+	bFiltered <- Filter(function(bv) sum(abs(bv)) < q98, bVects)
+  b <- colMeans(do.call(rbind, bFiltered))
+	betaMatrices <- lapply(mr[[idx]], function(m) m[2:(d+1),])
+	q98 <- quantile(sapply(betaMatrices, function(bm) sum(abs(bm))), 0.98)
+	bmFiltered <- Filter(function(bm) sum(abs(bm)) < q98, betaMatrices)
+	beta <- (1/length(bmFiltered)) * Reduce("+", bmFiltered)
   list(p, beta, b, mr_params)
 }
 
-pprms <- function(link)
+pprms <- function(link, prefix="./")
 {
-  for (n in c("5000", "10000", "100000", "500000", "1000000"))
+  toprint <- matrix(nrow=0, ncol=13) #13=1+2+1 + 1+2+1 + 1+3+1
+	for (n in c("5000", "10000", "100000", "500000", "1000000"))
   {
     for (method in 1:2)
     {
-      toprint <- c()
+			row <- c()
       for (d in c(2,5,10))
       {
-        name <- paste0("res_", n, "_", d, "_", link, ".RData")
+        name <- paste0(prefix, "res_", n, "_", d, "_", link, ".RData")
         params <- prms(name, method)
-        toprint <- c(toprint, c(
+        row <- c( row,
           sum(abs(params[[1]] - params[[4]]$p)),
           colSums(abs(params[[2]] - params[[4]]$beta)),
-          sum(abs(params[[3]] - params[[4]]$b))
-        ))
+          sum(abs(params[[3]] - params[[4]]$b)) )
       }
-      print(toprint, digits=2)
+      toprint <- rbind(toprint, row)
     }
   }
+	print(formatC(toprint, format="e", digits=1)) #for reporting
+	return (toprint)
 }