X-Git-Url: https://git.auder.net/?p=epclust.git;a=blobdiff_plain;f=epclust%2Ftests%2Ftestthat%2Ftest-computeSynchrones.R;h=60d885e7658ed70c07e65a27038d534994d3b565;hp=db139edefa31db83bc67c02f00110df4f8209ec9;hb=282342bafdc9ff65c5df98c6e2304d63b33b9fb2;hpb=3c5a4b0880db63367a474a568e1322b3999932fe

diff --git a/epclust/tests/testthat/test-computeSynchrones.R b/epclust/tests/testthat/test-computeSynchrones.R
index db139ed..60d885e 100644
--- a/epclust/tests/testthat/test-computeSynchrones.R
+++ b/epclust/tests/testthat/test-computeSynchrones.R
@@ -4,28 +4,27 @@ test_that("computeSynchrones behave as expected",
 {
 	# Generate 300 sinusoïdal series of 3 kinds: all series of indices == 0 mod 3 are the same
 	# (plus noise), all series of indices == 1 mod 3 are the same (plus noise) ...
-	n = 300
-	x = seq(0,9.5,0.1)
-	L = length(x) #96 1/4h
-	K = 3
-	s1 = cos(x)
-	s2 = sin(x)
-	s3 = c( s1[1:(L%/%2)] , s2[(L%/%2+1):L] )
+	n <- 300
+	x <- seq(0,9.5,0.1)
+	L <- length(x) #96 1/4h
+	K <- 3
+	s1 <- cos(x)
+	s2 <- sin(x)
+	s3 <- c( s1[1:(L%/%2)] , s2[(L%/%2+1):L] )
 	#sum((s1-s2)^2) == 96
 	#sum((s1-s3)^2) == 58
 	#sum((s2-s3)^2) == 38
-	s = list(s1, s2, s3)
-	series = matrix(nrow=L, ncol=n)
+	s <- list(s1, s2, s3)
+	series <- matrix(nrow=L, ncol=n)
 	for (i in seq_len(n))
-		series[,i] = s[[I(i,K)]] + rnorm(L,sd=0.01)
+		series[,i] <- s[[I(i,K)]] + rnorm(L,sd=0.01)
 
-	getRefSeries = function(indices) {
-		indices = indices[indices <= n]
+	getSeries <- function(indices) {
+		indices <- indices[indices <= n]
 		if (length(indices)>0) as.matrix(series[,indices]) else NULL
 	}
 
-	synchrones = computeSynchrones(bigmemory::as.big.matrix(cbind(s1,s2,s3)), getRefSeries,
-		n, 100, verbose=TRUE, parll=FALSE)
+	synchrones <- computeSynchrones(cbind(s1,s2,s3),getSeries,n,100,verbose=TRUE,parll=FALSE)
 
 	expect_equal(dim(synchrones), c(L,K))
 	for (i in 1:K)