X-Git-Url: https://git.auder.net/?a=blobdiff_plain;f=src%2Fadapters%2Fa.selectiontotale.c;fp=src%2Fadapters%2Fa.selectiontotale.c;h=0000000000000000000000000000000000000000;hb=7f1a6cf08a4d4d67e8a95b8c1c0cc74ff3deb5a4;hp=3bfab9f952eea95334af92ed27089ea9b06af584;hpb=31ef8a5c9bbaefcf40d2c2bad43b27d469c28c34;p=valse.git

diff --git a/src/adapters/a.selectiontotale.c b/src/adapters/a.selectiontotale.c
deleted file mode 100644
index 3bfab9f..0000000
--- a/src/adapters/a.selectiontotale.c
+++ /dev/null
@@ -1,90 +0,0 @@
-#include <R.h>
-#include <Rdefines.h>
-#include "selectiontotale.h"
-
-SEXP selectiontotale(
-	SEXP phiInit_,
-	SEXP rhoInit_,
-	SEXP piInit_,
-	SEXP gamInit_,
-	SEXP mini_,
-	SEXP maxi_,
-	SEXP gamma_,
-	SEXP glambda_,
-	SEXP X_,
-	SEXP Y_,
-	SEXP seuil_,
-	SEXP tau_
-) {
-	// Get matrices dimensions
-	SEXP dimX = getAttrib(X_, R_DimSymbol);
-	int n = INTEGER(dimX)[0];
-	int p = INTEGER(dimX)[1];
-	SEXP dimRhoInit = getAttrib(rhoInit_, R_DimSymbol);
-	int m = INTEGER(dimRhoInit)[0];
-	int k = INTEGER(dimRhoInit)[2];
-	int L = length(glambda_);
-
-	////////////
-	// INPUTS //
-	////////////
-
-	// get scalar parameters
-	int mini = INTEGER_VALUE(mini_);
-	int maxi = INTEGER_VALUE(maxi_);
-	double gamma = NUMERIC_VALUE(gamma_);
-	double seuil = NUMERIC_VALUE(seuil_);
-	double tau = NUMERIC_VALUE(tau_);
-
-	// Get pointers from SEXP arrays ; WARNING: by columns !
-	double* phiInit = REAL(phiInit_);
-	double* rhoInit = REAL(rhoInit_);
-	double* piInit = REAL(piInit_);
-	double* gamInit = REAL(gamInit_);
-	double* glambda = REAL(glambda_);
-	double* X = REAL(X_);
-	double* Y = REAL(Y_);
-
-	/////////////
-	// OUTPUTS //
-	/////////////
-
-	SEXP A1, A2, rho, pi, dimA, dimRho;
-	PROTECT(dimA = allocVector(INTSXP, 3));
-	int* pDimA = INTEGER(dimA);
-	pDimA[0] = p; pDimA[1] = m+1; pDimA[2] = L;
-	PROTECT(A1 = allocArray(INTSXP, dimA));
-	PROTECT(A2 = allocArray(INTSXP, dimA));
-	PROTECT(dimRho = allocVector(INTSXP, 4));
-	int* pDimRho = INTEGER(dimRho);
-	pDimRho[0] = m; pDimRho[1] = m; pDimRho[2] = k; pDimRho[3] = L;
-	PROTECT(rho = allocArray(REALSXP, dimRho));
-	PROTECT(pi = allocMatrix(REALSXP, k, L));
-	int *pA1=INTEGER(A1), *pA2=INTEGER(A2);
-	double *pRho=REAL(rho), *pPi=REAL(pi);
-
-	/////////////////////////////
-	// Call to selectiontotale //
-	/////////////////////////////
-
-	selectiontotale_core(
-		phiInit,rhoInit,piInit,gamInit,mini,maxi,gamma,glambda,X,Y,seuil,tau,
-		pA1,pA2,pRho,pPi,
-		n,p,m,k,L);
-
-	// Build list from OUT params and return it
-	SEXP listParams, listNames;
-	PROTECT(listParams = allocVector(VECSXP, 4));
-	char* lnames[4] = { "A1", "A2", "rho", "pi" }; //lists labels
-	PROTECT(listNames = allocVector(STRSXP, 4));
-	for (int i=0; i<4; i++)
-		SET_STRING_ELT(listNames,i,mkChar(lnames[i]));
-	setAttrib(listParams, R_NamesSymbol, listNames);
-	SET_VECTOR_ELT(listParams, 0, A1);
-	SET_VECTOR_ELT(listParams, 1, A2);
-	SET_VECTOR_ELT(listParams, 2, rho);
-	SET_VECTOR_ELT(listParams, 3, pi);
-
-	UNPROTECT(7);
-	return listParams;
-}