X-Git-Url: https://git.auder.net/?a=blobdiff_plain;f=reports%2Faccuracy.R;h=ee08078b909fd8fc4e55fb19167eeb09338caa29;hb=f805b3d9618a27d7d48fa5fc8083bab3c1d6b7e2;hp=2381524facb4aa021af0c9f178a23b529a9d2d95;hpb=9007ccc114c127211639e7c5b82495bc39803eb0;p=morpheus.git

diff --git a/reports/accuracy.R b/reports/accuracy.R
index 2381524..ee08078 100644
--- a/reports/accuracy.R
+++ b/reports/accuracy.R
@@ -2,23 +2,19 @@ optimBeta <- function(N, n, K, p, beta, b, link, ncores)
 {
 	library(morpheus)
 	res <- multiRun(
-		list(n=n, p=p, beta=beta, b=b, optargs=list(K=K, link=link)),
+		list(n=n, p=p, beta=beta, b=b, K=K, link=link),
 		list(
 			# morpheus
 			function(fargs) {
 				library(morpheus)
-				K <- fargs$optargs$K
-				M <- computeMoments(fargs$X, fargs$Y)
-				fargs$optargs$M <- M
-				mu <- computeMu(fargs$X, fargs$Y, fargs$optargs)
+				K <- fargs$K
+				mu <- computeMu(fargs$X, fargs$Y, list(K=K))
+        op <- optimParams(fargs$X, fargs$Y, K, fargs$link)
+        x_init <- list(p=rep(1/K,K-1), beta=mu, b=rep(0,K))
 				res2 <- NULL
 				tryCatch({
-					op <- optimParams(K,link,fargs$optargs)
-					x_init <- list(p=rep(1/K,K-1), beta=mu, b=rep(0,K))
-					res2 <- do.call(rbind, op$run(x_init))
-				}, error = function(e) {
-					res2 <- NA
-				})
+          res2 <- do.call(rbind, op$run(x_init))
+				}, error = function(e) {})
 				res2
 			}
 #			,
@@ -26,7 +22,7 @@ optimBeta <- function(N, n, K, p, beta, b, link, ncores)
 #			function(fargs) {
 #				library(flexmix)
 #				source("../patch_Bettina/FLXMRglm.R")
-#				K <- fargs$optargs$K
+#				K <- fargs$K
 #				dat <- as.data.frame( cbind(fargs$Y,fargs$X) )
 #				res2 <- NULL
 #				tryCatch({
@@ -46,11 +42,9 @@ optimBeta <- function(N, n, K, p, beta, b, link, ncores)
 		),
 		prepareArgs = function(fargs, index) {
 			library(morpheus)
-			io = generateSampleIO(fargs$n, fargs$p, fargs$beta, fargs$b, fargs$optargs$link)
+			io = generateSampleIO(fargs$n, fargs$p, fargs$beta, fargs$b, fargs$link)
 			fargs$X = io$X
 			fargs$Y = io$Y
-			fargs$optargs$K = ncol(fargs$beta)
-			fargs$optargs$M = computeMoments(io$X,io$Y)
 			fargs
 		}, N=N, ncores=ncores, verbose=TRUE)
 	p <- c(p, 1-sum(p))
@@ -114,7 +108,7 @@ if (d == 2) {
 }
 
 mr <- optimBeta(N, n, K, p, beta, b, link, ncores)
-mr_params <- list("N"=N, "n"=n, "K"=K, "d"=d, "link"=link,
+mr_params <- list("N"=N, "nc"=ncores, "n"=n, "K"=K, "d"=d, "link"=link,
 	"p"=c(p,1-sum(p)), "beta"=beta, "b"=b)
 
-save("mr", "mr_params", file=paste("multirun_",n,"_",d,"_",link,".RData",sep=""))
+save("mr", "mr_params", file=paste("res_",n,"_",d,"_",link,".RData",sep=""))