X-Git-Url: https://git.auder.net/?a=blobdiff_plain;f=pkg%2Ftests%2Ftestthat%2Ftest.computeFilaments.R;h=ca2fb692746fd8e042e42c3733b8d7454017ecf7;hb=af3b84f4cacade7d83221ca0249b546c50ddf340;hp=46f2e3f94a2431eef7c797567d898cc6e455441e;hpb=a65907cc939a5fe419613d3ba555b1d1c1af97d3;p=talweg.git diff --git a/pkg/tests/testthat/test.computeFilaments.R b/pkg/tests/testthat/test.computeFilaments.R index 46f2e3f..ca2fb69 100644 --- a/pkg/tests/testthat/test.computeFilaments.R +++ b/pkg/tests/testthat/test.computeFilaments.R @@ -1,7 +1,13 @@ context("Check that computeFilaments behaves as expected") -test_that("output is as expected on simulated series", +#shorthand: map 1->1, 2->2, 3->3, 4->1, ..., 149->2, 150->3 +I = function(i) + (i-1) %% 3 + 1 + +#MOCK data; NOTE: could be in inst/testdata as well +getDataTest = function(n) { + data = Data$new() x = seq(0,10,0.1) L = length(x) s1 = cos(x) @@ -11,41 +17,64 @@ test_that("output is as expected on simulated series", #sum((s1-s3)^2) == 57.03051 #sum((s2-s3)^2) == 40.5633 s = list( s1, s2, s3 ) - n = 150 series = list() for (i in seq_len(n)) { - index = (i%%3) + 1 - level = mean(s[[index]]) - serie = s[[index]] - level + rnorm(L,sd=0.05) + serie = s[[I(i)]] + rnorm(L,sd=0.01) + level = mean(serie) + serie = serie - level # 10 series with NAs for index 2 - if (index == 2 && i >= 60 && i<= 90) + if (I(i) == 2 && i >= 60 && i<= 90) serie[sample(seq_len(L),1)] = NA - series[[i]] = list("level"=level,"serie"=serie) #no need for more + data$append(c(), serie, level, c(), c()) #no need for more + } + data +} + +test_that("output is as expected on simulated series", +{ + data = getDataTest(150) + + # index 143 : serie type 2 + f = computeFilaments(data, 143, limit=60, plot=FALSE) + # Expected output: 23 series of type 3 (closer), then 50-3-10 series of type 2, then 143 + expect_identical(length(f$indices), as.integer(61)) #61 because result also contain today + expect_identical(length(f$colors), as.integer(61)) + expect_true(all(I(f$indices) >= 2)) + for (i in 1:23) + { + expect_equal(I(f$indices[i]), 3) + expect_match(f$colors[i], f$colors[1]) + } + for (i in 24:60) + { + expect_equal(I(f$indices[i]), 2) + expect_match(f$colors[i], f$colors[24]) } - data = new("Data", data=series) + expect_equal(f$indices[61], 143) + expect_match(f$colors[61], "#FF0000") #special color: current day in red + expect_match(f$colors[1], "#E*") + expect_match(f$colors[24], "#1*") - # index 142 : serie type 2 - f2 = computeFilaments(data, 142, limit=60, plot=FALSE) - # Expected output: 22 series of type 3 (closer), then 50-2-10 series of type 2 - # - # - # - # - # - # - # Simulate shift at origin when predict_at > 0 - series[2:(n+1)] = series[1:n] - series[[1]] = list("level"=0, "serie"=s[[1]][1:(L%/%2)]) - # index 143 : serie type 3 - f3 = computeFilaments(data, 143, limit=70, plot=FALSE) - # Expected output: 22 series of type 2 (closer) then 50-2 series of type 3 - # ATTENTION au shift - # - # - # index 144 : serie type 1 - f1 = computeFilaments(data, 144, limit=50, plot=FALSE) - # Expected output: 2 series of type 3 (closer), then 50-2 series of type 1 - # - expect_that( diff_norm, is_less_than(0.5) ) + # index 142 : serie type 1 + f = computeFilaments(data, 142, limit=50, plot=FALSE) + # Expected output: 13 series of type 3 (closer), then 50-10-3 series of type 1, then 142 + # NOTE: -10 because only past days with no-NAs tomorrow => exclude type 1 in [60,90[ + expect_identical(length(f$indices), as.integer(51)) + expect_identical(length(f$colors), as.integer(51)) + expect_true(all(I(f$indices) != 2)) + for (i in 1:13) + { + expect_equal(I(f$indices[i]), 3) + expect_match(f$colors[i], f$colors[1]) + } + for (i in 14:50) + { + expect_equal(I(f$indices[i]), 1) + expect_match(f$colors[i], f$colors[14]) + } + expect_equal(f$indices[51], 142) + expect_match(f$colors[51], "#FF0000") + expect_match(f$colors[1], "#E*") + expect_match(f$colors[14], "#1*") })