X-Git-Url: https://git.auder.net/?a=blobdiff_plain;f=pkg%2FR%2Futils.R;h=7e4e332b7465284d1d422b32bb9c19fa058c1a37;hb=f71b975b140342f7ea80275359b7f4f9aa75153a;hp=3649f5865a72fbeeb182cd6ef677fcb963b361e9;hpb=6774e53de7b8bdac191d6203a380ad46c3b4d9ba;p=talweg.git

diff --git a/pkg/R/utils.R b/pkg/R/utils.R
index 3649f58..7e4e332 100644
--- a/pkg/R/utils.R
+++ b/pkg/R/utils.R
@@ -1,14 +1,14 @@
 #' dateIndexToInteger
 #'
-#' Transform a (potential) date index into an integer (relative to data)
+#' Transform a (potential) date index into an integer (relative to data beginning).
 #'
 #' @param index Date (or integer) index
-#' @param data Object of class \code{Data}
+#' @param data Object of class Data, output of \code{getData()}
 #'
 #' @export
 dateIndexToInteger = function(index, data)
 {
-	#works on integers too: trust input
+	# Works on integers too: trust input
 	if (is.numeric(index))
 		index = as.integer(index)
 	if (is.integer(index))
@@ -16,7 +16,8 @@ dateIndexToInteger = function(index, data)
 
 	if (inherits(index, "Date") || is.character(index))
 	{
-		tryCatch(indexAsDate <- as.Date(index), error=function(e) stop("Unrecognized index format"))
+		tryCatch(indexAsDate <- as.Date(index),
+			error=function(e) stop("Unrecognized index format"))
 		#TODO: tz arg to difftime ?
 		integerIndex <- round( as.numeric(
 			difftime(indexAsDate, as.Date(data$getTime(1)[1])) ) ) + 1
@@ -29,15 +30,14 @@ dateIndexToInteger = function(index, data)
 
 #' integerIndexToDate
 #'
-#' Transform an integer index to date index (relative to data)
+#' Transform an integer index (relative to data beginning) into a date index.
 #'
-#' @param index Date (or integer) index
-#' @param data Object of class \code{Data}
+#' @inheritParams dateIndexToInteger
 #'
 #' @export
 integerIndexToDate = function(index, data)
 {
-	#works on dates too: trust input
+	# Works on dates too: trust input
 	if (is.character(index))
 		index = as.Date(index)
 	if (is(index,"Date"))
@@ -53,7 +53,8 @@ integerIndexToDate = function(index, data)
 
 #' getSimilarDaysIndices
 #'
-#' Find similar days indices in the past.
+#' Find similar days indices in the past; at least same type of day in the week:
+#' monday=tuesday=wednesday=thursday != friday != saturday != sunday.
 #'
 #' @param index Day index (numeric or date)
 #' @param data Reference dataset, object output of \code{getData}
@@ -62,38 +63,58 @@ integerIndexToDate = function(index, data)
 #' @param days_in Optional set to intersect with results (NULL to discard)
 #'
 #' @export
-getSimilarDaysIndices = function(index, data, limit, same_season, days_in=NULL)
+getSimilarDaysIndices = function(index, data, limit, same_season,
+	days_in=NULL, operational=TRUE)
 {
 	index = dateIndexToInteger(index, data)
 
 	# Look for similar days (optionally in same season)
-	i = index - 1
 	days = c()
 	dt_ref = as.POSIXlt(data$getTime(index)[1]) #first date-time of current day
 	day_ref = dt_ref$wday #1=monday, ..., 6=saturday, 0=sunday
 	month_ref = as.POSIXlt(data$getTime(index)[1])$mon+1 #month in 1...12
-	while (i >= 1 && length(days) < limit)
+	i = index - 1
+	if (!operational)
+		j = index + 1
+	while (length(days) < min( limit, ifelse(is.null(days_in),Inf,length(days_in)) ))
 	{
-		dt = as.POSIXlt(data$getTime(i)[1])
-		if ((is.null(days_in) || i %in% days_in) && .isSameDay(dt$wday, day_ref))
+		if (i < 1 && j > data$getSize())
+			break
+		if (i >= 1)
 		{
-			if (!same_season || .isSameSeason(dt$mon+1, month_ref))
-				days = c(days, i)
+			dt = as.POSIXlt(data$getTime(i)[1])
+			if ((is.null(days_in) || i %in% days_in) && .isSameDay(dt$wday, day_ref))
+			{
+				if (!same_season || .isSameSeason(dt$mon+1, month_ref))
+					days = c(days, i)
+			}
+			i = i - 1
+		}
+		if (!operational && j <= data$getSize())
+		{
+			dt = as.POSIXlt(data$getTime(j)[1])
+			if ((is.null(days_in) || j %in% days_in) && .isSameDay(dt$wday, day_ref))
+			{
+				if (!same_season || .isSameSeason(dt$mon+1, month_ref))
+					days = c(days, j)
+			}
+			j = j + 1
 		}
-		i = i - 1
 	}
 	return ( days )
 }
 
 # isSameSeason
 #
-# Check if two months fall in the same "season" (defined by estimated pollution rate)
+# Check if two months fall in the same "season" (defined by estimated pollution rate).
 #
-# @param month month index to test
-# @param month_ref month to compare to
+# @param month Month index to test
+# @param month_ref Month to compare to
 #
 .isSameSeason = function(month, month_ref)
 {
+#	if (month_ref == 3) #TODO: same as Bruno (but weird)
+#		return (month %in% c(2,3,4,9,10))
 	if (month_ref %in% c(11,12,1,2)) #~= mid-polluted
 		return (month %in% c(11,12,1,2))
 	if (month_ref %in% c(3,4,9,10)) #~= high-polluted
@@ -103,32 +124,29 @@ getSimilarDaysIndices = function(index, data, limit, same_season, days_in=NULL)
 
 # isSameDay
 #
-# Monday=Tuesday=Wednesday=Thursday ; Friday, Saturday, Sunday: specials
+# Monday=Tuesday=Wednesday=Thursday ; Friday, Saturday, Sunday: specials.
 #
-# @param day day index to test
-# @param day_ref day index to compare to
+# @param day Day index to test
+# @param day_ref Day index to compare to
 #
 .isSameDay = function(day, day_ref)
 {
-	if (day_ref == 0)
-		return (day==0)
-	if (day_ref <= 4)
-		return (day <= 4)
+	if (day_ref %in% 1:4)
+		return (day %in% 1:4)
 	return (day == day_ref)
 }
 
-#' getNoNA2
-#'
-#' Get indices in data of no-NA series followed by no-NA, within [first,last] range.
-#'
-#' @param data Object of class Data
-#' @param first First index (included)
-#' @param last Last index (included)
-#'
-#' @export
-getNoNA2 = function(data, first, last)
+# getNoNA2
+#
+# Get indices in data of no-NA series preceded by no-NA, within [first,last] range.
+#
+# @inheritParams dateIndexToInteger
+# @param first First index (included)
+# @param last Last index (included)
+#
+.getNoNA2 = function(data, first, last)
 {
 	(first:last)[ sapply(first:last, function(i)
-		!any( is.na(data$getCenteredSerie(i)) | is.na(data$getCenteredSerie(i+1)) )
+		!any( is.na(data$getSerie(i-1)) | is.na(data$getSerie(i)) )
 	) ]
 }