X-Git-Url: https://git.auder.net/?a=blobdiff_plain;f=pkg%2FR%2FoptimParams.R;h=f06581ef0d3830fda28557c1def41204e7c04ec3;hb=ef0d907c50abe7c4dc0d3c0e94645b5bf6ef3626;hp=c42e6c54e022d454196c2ded156b3a4d1caa553d;hpb=44559add0e38058d9ce539c4b91246e4a088f67a;p=morpheus.git diff --git a/pkg/R/optimParams.R b/pkg/R/optimParams.R index c42e6c5..f06581e 100644 --- a/pkg/R/optimParams.R +++ b/pkg/R/optimParams.R @@ -122,7 +122,7 @@ setRefClass( dd <- d + d^2 + d^3 M <- Moments(θ) Omega <- matrix( .C("Compute_Omega", - X=as.double(X), Y=as.double(Y), M=as.double(M), + X=as.double(X), Y=as.integer(Y), M=as.double(M), pn=as.integer(n), pd=as.integer(d), W=as.double(W), PACKAGE="morpheus")$W, nrow=dd, ncol=dd ) MASS::ginv(Omega) @@ -257,14 +257,16 @@ setRefClass( else if (!is.numeric(θ0$b) || length(θ0$b) != K || any(is.na(θ0$b))) stop("θ0$b: length K, no NA") # TODO: stopping condition? N iterations? Delta <= epsilon ? - for (loop in 1:10) + loopMax <- 2 + for (loop in 1:loopMax) { op_res = constrOptim( linArgs(θ0), .self$f, .self$grad_f, ui=cbind( rbind( rep(-1,K-1), diag(K-1) ), matrix(0, nrow=K, ncol=(d+1)*K) ), ci=c(-1,rep(0,K-1)) ) - W <<- computeW(expArgs(op_res$par)) + if (loop < loopMax) #avoid computing an extra W + W <<- computeW(expArgs(op_res$par)) print(op_res$value) #debug print(expArgs(op_res$par)) #debug }