X-Git-Url: https://git.auder.net/?a=blobdiff_plain;f=pkg%2FR%2FmultiRun.R;h=8b70d6d2adb184b8cde0e7667378a1396498aefc;hb=4bf8494d8484be5eab39dd2a83e649678a2de713;hp=0a2a8333b21fe7fda32e9238d67dbf0057d0e6e3;hpb=5fc1b9d9bbb20ebf5228792f5885b77991c0cec9;p=morpheus.git

diff --git a/pkg/R/multiRun.R b/pkg/R/multiRun.R
index 0a2a833..8b70d6d 100644
--- a/pkg/R/multiRun.R
+++ b/pkg/R/multiRun.R
@@ -11,12 +11,13 @@
 #' @param prepareArgs Prepare arguments for the functions inside estimParams
 #' @param N Number of runs
 #' @param ncores Number of cores for parallel runs (<=1: sequential)
+#' @param agg Aggregation method (default: lapply)
 #' @param verbose TRUE to indicate runs + methods numbers
 #'
 #' @return A list of nf aggregates of N results (matrices).
 #'
 #' @examples
-#' \dontrun{
+#' \donttest{
 #' β <- matrix(c(1,-2,3,1),ncol=2)
 #'
 #' # Bootstrap + computeMu, morpheus VS flexmix ; assumes fargs first 3 elts X,Y,K
@@ -56,8 +57,7 @@
 #'     library(morpheus)
 #'     K <- fargs$optargs$K
 #'     μ <- computeMu(fargs$X, fargs$Y, fargs$optargs)
-#'     V <- list( p=rep(1/K,K-1), β=μ, b=c(0,0) )
-#'     optimParams(V,fargs$optargs)$β
+#'     optimParams(fargs$K,fargs$link,fargs$optargs)$run(list(β=μ))$β
 #'   },
 #'   # flexmix
 #'   function(fargs) {
@@ -73,7 +73,8 @@
 #'     io = generateSampleIO(fargs$n, fargs$p, fargs$β, fargs$b, fargs$optargs$link)
 #'     fargs$X = io$X
 #'     fargs$Y = io$Y
-#'     fargs$optargs$K = ncol(fargs$β)
+#'     fargs$K = ncol(fargs$β)
+#'     fargs$link = fargs$optargs$link
 #'     fargs$optargs$M = computeMoments(io$X,io$Y)
 #'     fargs
 #'   }, N=10, ncores=3)