X-Git-Url: https://git.auder.net/?a=blobdiff_plain;f=pkg%2FR%2Fmain.R;h=bb1e3fe57ef343847bbd1d67e9826d077f80a1ff;hb=23b9fb13bc6e82d7ca43bfb83aa85b6cd69c52c0;hp=632d90ba6203aba80f57ca0719ff6a87cfd7ef0f;hpb=f7ac8e154ed78624db1a9992adb5576cae499989;p=valse.git diff --git a/pkg/R/main.R b/pkg/R/main.R index 632d90b..bb1e3fe 100644 --- a/pkg/R/main.R +++ b/pkg/R/main.R @@ -123,6 +123,8 @@ valse <- function(X, Y, procedure = "LassoMLE", selecMod = "DDSE", gamma = 1, mi complexity = sumPen, contrast = -LLH) })) tableauRecap <- tableauRecap[which(tableauRecap[, 4] != Inf), ] + + if (verbose == TRUE) print(tableauRecap) modSel <- capushe::capushe(tableauRecap, n) @@ -140,26 +142,10 @@ valse <- function(X, Y, procedure = "LassoMLE", selecMod = "DDSE", gamma = 1, mi modSel@AIC_capushe$model } - - mod <- as.character(tableauRecap[indModSel, 1]) - listMod <- as.integer(unlist(strsplit(mod, "[.]"))) + listMod <- as.integer(unlist(strsplit(as.character(indModSel), "[.]"))) modelSel <- models_list[[listMod[1]]][[listMod[2]]] - - ## Affectations - Gam <- matrix(0, ncol = length(modelSel$pi), nrow = n) - for (i in 1:n) - { - for (r in 1:length(modelSel$pi)) - { - sqNorm2 <- sum((Y[i, ] %*% modelSel$rho[, , r] - X[i, ] %*% modelSel$phi[, , r])^2) - Gam[i, r] <- modelSel$pi[r] * exp(-0.5 * sqNorm2) * gdet(modelSel$rho[, , r]) - } - } - Gam <- Gam/rowSums(Gam) - modelSel$affec <- apply(Gam, 1, which.max) - modelSel$proba <- Gam modelSel$tableau <- tableauRecap - + if (plot) print(plot_valse(X, Y, modelSel, n))